Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G212800 Theobroma cacao HOM05D066189 ORTHO05D010556 3.5e-70 268.1 126 100.0
COL.COLO4_34093 Corchorus olitorius HOM05D066189 ORTHO05D010556 1.3e-48 196.4 121 76.9
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 6.2e-11 71.2 121 32.2
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.4e-10 70.1 119 31.9
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 3.1e-10 68.9 100 34.0
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 1.2e-09 67.0 98 31.6
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 2.6e-09 65.9 100 33.0
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.7e-08 63.2 119 31.1
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 1.7e-08 63.2 99 33.3
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 1.7e-08 63.2 73 38.4
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 3.8e-08 62.0 99 33.3
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 4.9e-08 61.6 116 30.2
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 6.4e-08 61.2 99 30.3
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 6.4e-08 61.2 115 31.3
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 8.4e-08 60.8 99 34.3
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 2.4e-07 59.3 77 36.4
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 4.2e-07 58.5 99 33.3
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 4.2e-07 58.5 99 32.3
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 5.5e-07 58.2 70 31.4
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 5.5e-07 58.2 70 31.4
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 7.1e-07 57.8 99 29.3
CAN.G1745.2 Capsicum annuum HOM05D005430 ORTHO05D007814 1.2e-06 57.0 63 39.7
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 1.2e-06 57.0 100 29.0
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.2e-06 57.0 100 32.0
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.6e-06 56.6 129 31.8
THA.LOC104821619 Tarenaya hassleriana HOM05D005430 ORTHO05D007814 1.6e-06 56.6 76 39.5
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.1e-06 56.2 99 28.3
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 2.1e-06 56.2 99 28.3
Haze_11547 Corylus avellana HOM05D008849 ORTHO05D010556 3.5e-06 55.5 104 30.8
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 7.9e-06 54.3 125 32.0


User provided reference genes

Program Settings