Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G197600 Theobroma cacao HOM05D009250 ORTHO05D011052 4.9e-57 224.2 108 100.0
Thecc.04G197800 Theobroma cacao HOM05D009250 ORTHO05D011052 5.1e-54 214.2 112 94.6
Gohir.D02G023600 Gossypium hirsutum HOM05D009250 ORTHO05D011052 6.5e-25 117.5 89 64.0
Gorai.005G029700 Gossypium raimondii HOM05D009250 ORTHO05D011052 6.5e-25 117.5 89 64.0
Gohir.A02G020200 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.4e-24 116.3 89 62.9
Gohir.A02G020100 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.4e-16 89.7 67 65.7
Gohir.D02G023500 Gossypium hirsutum HOM05D009250 ORTHO05D011052 7.2e-16 87.4 95 50.5
Gorai.005G029500 Gossypium raimondii HOM05D009250 ORTHO05D011052 7.2e-16 87.4 95 50.5
Prupe.8G202600 Prunus persica HOM05D009250 ORTHO05D011052 3.9e-14 81.6 58 63.8
Prupe.8G202700 Prunus persica HOM05D009250 ORTHO05D011052 8.8e-14 80.5 81 53.1
Prupe.2G158900 Prunus persica HOM05D009250 ORTHO05D011052 2.6e-13 79.0 94 46.8
Duzib133G0111 Durio zibethinus HOM05D009250 ORTHO05D011052 3.1e-11 72.0 73 46.6
FvH4_7g13511 Fragaria vesca HOM05D009250 ORTHO05D011052 5.3e-11 71.2 58 53.4
FAN06G2339 Fragaria x ananassa HOM05D009250 ORTHO05D011052 7.0e-11 70.9 58 53.4
MD01G1048700 Malus domestica HOM05D009250 ORTHO05D011052 7.0e-11 70.9 86 43.0
Duzib138G0906 Durio zibethinus HOM05D009250 ORTHO05D011052 2.6e-10 68.9 52 57.7
RcHm_v2.0_Chr1g0353031 Rosa chinensis HOM05D009250 ORTHO05D011052 4.5e-10 68.2 58 50.0
FAN06G0178 Fragaria x ananassa HOM05D009250 ORTHO05D011052 5.9e-10 67.8 58 53.4
Gohir.A02G020000 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.3e-09 66.6 52 63.5
Thecc.01G365700 Theobroma cacao HOM05D009250 ORTHO05D011052 1.3e-09 66.6 55 56.4
Gohir.A07G143700 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.7e-09 66.2 55 54.5
Gohir.D07G149500 Gossypium hirsutum HOM05D009250 ORTHO05D011052 1.7e-09 66.2 55 54.5
Gorai.001G170900 Gossypium raimondii HOM05D009250 ORTHO05D011052 1.7e-09 66.2 55 54.5
PGR042G1809 Punica granatum HOM05D009250 ORTHO05D011052 5.0e-09 64.7 76 47.4
Ca_25781_v3 Cicer arietinum L. HOM05D009250 ORTHO05D011052 3.2e-08 62.0 90 36.7
THA.LOC104817277 Tarenaya hassleriana HOM05D009250 ORTHO05D011052 7.2e-08 60.8 52 53.8
TWI23G0141 Tripterygium wilfordii HOM05D009250 ORTHO05D011052 2.1e-07 59.3 55 52.7
arahy.Tifrunner.gnm1.ann1.D08QP7 Arachis hypogaea HOM05D009250 ORTHO05D011052 4.7e-07 58.2 54 48.1
Dinv32439 Davidia involucrata HOM05D023406 ORTHO05D023235 8.0e-07 57.4 85 41.2
Dinv43776 Davidia involucrata HOM05D024296 ORTHO05D026314 1.8e-06 56.2 52 46.2
Actinidia09994 Actinidia chinensis HOM05D024296 ORTHO05D026314 6.7e-06 54.3 54 50.0
Atru.chr5.436 Acer truncatum HOM05D009250 ORTHO05D011052 8.8e-06 53.9 59 42.4
RcHm_v2.0_Chr2g0142351 Rosa chinensis HOM05D009250 ORTHO05D011052 8.8e-06 53.9 49 49.0


User provided reference genes

Program Settings