Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 8.8e-134 480.3 249 100.0
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.9e-128 462.6 249 95.2
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.0e-126 455.3 249 93.2
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.2e-125 453.4 249 92.8
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.3e-125 451.8 249 92.4
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 3.7e-124 448.4 249 92.4
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.2e-119 433.3 250 87.6
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.6e-119 431.8 250 87.2
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 8.0e-119 430.6 248 86.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.4e-118 429.9 248 85.9
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 3.4e-117 425.2 249 83.9
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 7.5e-117 424.1 248 84.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.7e-116 422.9 244 84.8
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 6.3e-116 421.0 248 85.1
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.1e-115 420.2 248 84.3
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 7.0e-115 417.5 245 84.5
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 9.1e-115 417.2 247 83.4
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 5.9e-114 414.5 242 83.9
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 7.7e-114 414.1 240 85.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.7e-113 412.9 242 83.9
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.8e-113 411.8 242 85.5
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.1e-112 410.2 248 82.3
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.5e-112 409.8 250 82.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.5e-112 409.1 248 81.9
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 2.5e-112 409.1 245 82.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.2e-112 408.7 250 82.4
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 4.2e-112 408.3 250 80.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 5.5e-112 407.9 242 83.1
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.1e-111 406.0 245 82.4
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.6e-111 405.2 242 83.9
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 8.0e-111 404.1 248 78.6
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 8.0e-111 404.1 248 78.6
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 8.0e-111 404.1 248 78.6
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.0e-110 403.7 248 77.8
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.8e-110 402.9 243 81.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.8e-110 402.9 245 78.8
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 81.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.3e-110 402.5 246 79.3
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 3.0e-110 402.1 248 77.0
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 3.0e-110 402.1 242 81.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-110 401.7 244 81.6
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-110 401.7 244 81.6
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 4.0e-110 401.7 245 78.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 5.2e-110 401.4 250 80.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 8.8e-110 400.6 248 79.4
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 8.8e-110 400.6 248 79.4
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-109 400.2 245 78.4
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.2e-109 400.2 242 81.8
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.5e-109 399.8 248 76.6
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.5e-109 399.8 242 82.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.5e-109 399.8 255 79.2
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.5e-109 399.8 248 79.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 5.7e-109 397.9 243 81.1
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.7e-108 396.4 247 78.1
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.7e-108 396.4 243 80.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.9e-108 394.8 245 80.0
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.4e-107 393.3 250 76.4
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 2.4e-107 392.5 249 77.1
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.4e-107 392.5 243 79.4
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 4.1e-107 391.7 245 77.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 4.1e-107 391.7 248 77.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 7.0e-107 391.0 250 79.2
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 9.2e-107 390.6 249 77.9
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 2.7e-106 389.0 246 79.7
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.9e-105 385.6 243 79.8
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 75.5
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.1e-104 383.6 267 71.9
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.9e-104 382.9 245 78.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 4.3e-104 381.7 248 75.0
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 5.6e-104 381.3 243 74.9
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 2.8e-103 379.0 203 95.6
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 4.7e-103 378.3 248 75.8
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 4.0e-102 375.2 245 75.1
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.6e-101 372.5 243 74.5
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 9.8e-101 370.5 240 74.6
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.9e-100 368.2 234 76.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 3.2e-99 365.5 243 74.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 5.0e-97 358.2 203 88.2
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 7.3e-96 354.4 243 71.6
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.4e-94 350.1 207 83.6
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 8.9e-94 347.4 245 69.0
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.2e-93 347.1 248 71.0
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.5e-93 346.7 213 82.2
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 7.5e-93 344.4 242 70.7
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 9.8e-93 344.0 242 70.7
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.3e-92 343.6 242 69.8
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.7e-92 342.0 217 78.8
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 7.8e-90 334.3 245 70.6
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.7e-89 333.2 245 66.9
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 6.6e-89 331.3 184 90.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 4.3e-88 328.6 199 77.4
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 4.3e-88 328.6 245 66.1
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 4.4e-85 318.5 202 81.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 7.5e-85 317.8 248 66.5
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 2.1e-82 309.7 194 72.7
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 3.6e-79 298.9 247 64.8
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 4.7e-79 298.5 243 65.8
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.4e-75 287.0 259 63.7
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.8e-70 270.0 242 54.5
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.4e-67 260.4 242 51.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 7.3e-64 248.1 237 53.2
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.6e-63 246.9 239 51.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.1e-62 244.2 202 66.8
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.4e-62 243.8 156 73.1
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-61 240.4 242 47.9
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 9.9e-53 211.1 153 68.6
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 8.4e-52 208.0 153 68.0
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 8.4e-52 208.0 161 66.5
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 7.9e-50 201.4 132 73.5
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-49 199.9 119 83.2
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-48 196.8 120 82.5
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 2.5e-48 196.4 152 61.8
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.9e-36 156.4 119 66.4
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 4.6e-34 149.1 91 80.2
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 2.3e-33 146.7 92 77.2
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 5.1e-33 145.6 230 38.3
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-32 144.4 93 72.0
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.6e-18 97.4 130 52.3
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 2.7e-18 96.7 71 66.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 8.0e-10 68.6 42 73.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 9.7e-08 61.6 38 86.8


User provided reference genes

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