Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 4.9e-140 501.1 255 100.0
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 4.6e-114 414.8 255 84.7
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.5e-109 399.8 255 80.8
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 8.2e-95 350.9 253 74.7
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.2e-92 342.8 255 73.7
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.2e-91 339.0 255 72.9
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 7.2e-91 337.8 255 72.9
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.4e-86 323.6 255 71.0
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.0e-84 317.4 255 69.0
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.3e-84 317.0 255 69.4
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.8e-74 282.7 261 65.9
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.0e-60 237.7 261 54.8
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.7e-58 228.8 257 55.6
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.8e-57 226.9 259 54.1
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.2e-57 225.3 259 53.7
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.6e-53 213.8 259 51.7
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 6.0e-53 211.8 258 51.9
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.3e-52 210.7 256 52.3
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 1.7e-52 210.3 257 48.2
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.1e-51 207.6 265 50.2
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 7.3e-51 204.9 262 48.1
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 9.9e-48 194.5 269 48.0
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 5.4e-46 188.7 261 46.7
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.6e-45 187.2 232 52.2
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.3e-44 183.3 235 50.2
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.6e-43 178.7 267 45.3
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.1e-42 176.8 257 42.8
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.1e-41 174.5 269 46.5
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.1e-41 174.5 259 41.7
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 5.2e-41 172.2 261 45.2
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.2e-40 171.0 257 42.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.4e-40 169.1 256 44.5
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.3e-38 161.4 257 42.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 6.6e-36 155.2 233 46.4
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 1.6e-34 150.6 264 42.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 6.2e-34 148.7 241 42.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.1e-33 147.9 260 41.9
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 3.1e-33 146.4 263 42.2
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 9.0e-33 144.8 264 41.3
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.0e-32 143.7 275 39.6
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.4e-32 142.5 256 37.9
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 7.6e-32 141.7 157 58.6
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.8e-31 139.4 207 43.5
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 6.4e-31 138.7 261 39.5
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 8.4e-31 138.3 265 41.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 4.2e-30 136.0 261 37.9
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 7.1e-30 135.2 159 49.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 7.1e-30 135.2 267 40.8
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 9.3e-30 134.8 256 39.1
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.1e-29 133.7 261 38.7
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 3.5e-29 132.9 265 41.9
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.0e-28 131.3 263 37.6
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.3e-28 131.0 185 47.0
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 2.5e-27 126.7 255 39.2
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.5e-27 126.7 261 36.8
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.6e-27 124.8 170 47.6
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.4e-25 120.9 224 41.5
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.2e-24 117.9 168 43.5
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.0e-24 117.1 259 38.2
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 4.5e-24 115.9 212 40.1
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 9.9e-24 114.8 261 36.4
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 9.9e-24 114.8 257 37.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 9.9e-24 114.8 257 37.0
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 2.2e-23 113.6 262 38.5
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.9e-23 113.2 259 36.3
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 2.9e-23 113.2 228 41.7
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 6.4e-23 112.1 284 34.5
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 6.4e-23 112.1 263 40.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 8.4e-23 111.7 262 34.7
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.1e-22 111.3 257 35.4
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 3.2e-22 109.8 266 34.2
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 4.2e-22 109.4 282 36.2
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 4.2e-22 109.4 257 35.0
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.2e-22 109.4 221 39.8
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 9.3e-22 108.2 264 37.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.2e-21 107.8 260 33.8
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.2e-21 107.8 259 35.9
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.1e-21 107.1 259 35.9
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.7e-21 106.7 259 35.5
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 3.5e-21 106.3 278 37.1
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 4.6e-21 105.9 222 40.1
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 1.8e-20 104.0 262 35.9
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 3.9e-20 102.8 263 36.1
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.7e-20 102.1 229 35.4
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.7e-20 101.7 257 33.9
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 8.7e-20 101.7 267 37.5
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 4.3e-19 99.4 258 34.9
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 9.6e-19 98.2 257 33.1
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.3e-18 97.8 293 29.4
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.6e-18 97.4 258 34.9
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.6e-18 97.4 246 34.6
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 2.1e-18 97.1 266 34.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 2.8e-18 96.7 265 35.1
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.1e-17 94.7 255 32.9
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.1e-17 94.7 259 33.6
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.2e-16 91.3 265 36.6
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 3.4e-16 89.7 270 34.1
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 3.4e-16 89.7 250 34.0
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 5.8e-16 89.0 265 36.2
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 5.8e-16 89.0 199 36.2
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 1.3e-15 87.8 231 34.2
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.2e-15 87.0 231 33.8
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.9e-15 85.9 238 31.9
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 1.6e-13 80.9 231 33.3
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 8.7e-12 75.1 273 28.2
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 2.5e-11 73.6 263 29.7
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 2.5e-11 73.6 259 32.0
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 3.3e-11 73.2 246 31.3
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 5.7e-11 72.4 252 29.8
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.1e-10 70.5 124 40.3
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 8.2e-10 68.6 173 34.7
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 9.0e-09 65.1 142 37.3
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.7e-07 60.8 109 44.0
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.2e-07 60.5 285 26.3
GSVIVG01034560001 Vitis vinifera HOM05D006494 ORTHO05D007787 1.4e-06 57.8 73 47.9
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 1.9e-06 57.4 251 31.5
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 5.5e-06 55.8 121 36.4
arahy.Tifrunner.gnm1.ann1.P4DBMR Arachis hypogaea HOM05D062081 ORTHO05D007787 7.2e-06 55.5 262 30.5


User provided reference genes

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