Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 5.3e-185 651.0 349 100.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 8.5e-143 510.8 349 79.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 4.4e-131 471.9 354 73.4
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 9.8e-115 417.5 349 67.9
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.9e-114 416.0 349 68.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.6e-111 404.4 349 65.6
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 5.6e-86 322.0 228 74.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 7.3e-86 321.6 364 54.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.2e-85 320.9 261 67.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 4.7e-85 318.9 239 72.4
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 8.1e-85 318.2 258 70.2
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.2e-83 314.3 365 54.2
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 2.0e-83 313.5 376 53.2
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 5.8e-83 312.0 281 64.4
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 3.8e-82 309.3 361 54.6
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.2e-80 304.3 322 56.2
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.6e-80 303.9 368 53.8
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.6e-79 298.5 290 59.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 7.3e-78 295.0 284 62.3
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.3e-77 294.3 367 51.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 8.1e-77 291.6 273 60.8
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.1e-76 291.2 230 67.4
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.1e-76 289.7 238 66.0
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.0e-76 289.3 266 63.2
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 6.9e-76 288.5 225 68.0
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.9e-76 288.5 228 69.3
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 9.0e-76 288.1 243 64.2
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.0e-76 288.1 361 50.7
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 3.4e-75 286.2 236 66.1
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.5e-75 285.8 225 69.3
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.5e-75 285.8 276 60.9
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 5.8e-75 285.4 265 61.5
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.6e-75 285.0 270 62.2
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.7e-74 283.9 251 62.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-74 283.5 276 60.9
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 3.8e-74 282.7 299 56.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.4e-74 282.0 270 61.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 8.4e-74 281.6 296 57.8
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-73 281.2 270 61.9
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.1e-73 281.2 250 60.8
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.4e-73 280.8 264 59.8
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-73 280.8 248 65.7
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-73 280.4 259 58.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-73 280.4 259 57.9
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.9e-73 280.4 228 64.9
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.9e-73 280.4 254 63.0
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 2.4e-73 280.0 316 55.7
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.2e-73 279.6 367 47.4
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.2e-73 279.3 265 61.9
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.1e-73 278.5 283 59.4
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.7e-72 276.6 228 64.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 3.5e-72 276.2 228 63.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.5e-72 276.2 231 64.9
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 4.6e-72 275.8 264 58.7
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 6.0e-72 275.4 263 58.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.0e-71 274.6 279 58.1
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.3e-71 274.2 254 60.2
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.8e-71 273.9 274 58.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.0e-71 273.1 272 57.7
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.9e-71 272.7 243 61.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 8.7e-71 271.6 266 60.5
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.9e-70 270.4 390 46.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 2.5e-70 270.0 295 54.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 5.6e-70 268.9 252 59.9
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.6e-69 267.3 278 57.2
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.4e-68 264.2 223 66.8
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.2e-67 261.2 344 48.5
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.5e-67 260.8 240 60.8
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.3e-66 257.7 285 56.8
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.7e-66 257.3 244 58.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.7e-66 257.3 222 65.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 6.4e-66 255.4 234 62.4
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.4e-65 253.4 253 59.7
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 7.1e-65 251.9 227 60.4
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 9.3e-65 251.5 172 76.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.2e-64 251.1 229 60.3
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.6e-64 250.8 248 57.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 2.1e-64 250.4 189 70.4
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.5e-64 249.6 251 55.4
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.5e-64 249.6 189 71.4
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 4.6e-64 249.2 223 63.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 4.6e-64 249.2 189 70.9
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 6.0e-64 248.8 220 65.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 6.0e-64 248.8 220 65.0
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 6.0e-64 248.8 220 63.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.3e-63 247.7 264 56.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 6.7e-63 245.4 220 64.1
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 5.6e-62 242.3 226 57.5
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.3e-61 241.1 226 57.1
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 4.0e-60 236.1 277 52.3
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.3e-58 231.1 226 55.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 4.9e-58 229.2 209 60.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.2e-57 226.5 335 46.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 7.1e-57 225.3 214 57.9
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-56 223.8 180 65.0
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-55 221.1 192 64.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.7e-54 214.9 261 43.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 5.3e-52 209.1 147 72.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.9e-51 205.7 190 60.5
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.1e-49 201.4 155 69.7
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 7.9e-48 195.3 178 65.2
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.5e-46 190.3 211 55.0
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 9.7e-46 188.3 315 44.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-42 178.3 235 49.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 5.3e-36 156.0 158 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 9.1e-36 155.2 184 45.1
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.2e-34 150.6 193 46.1
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-31 141.7 123 64.2
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.3e-31 140.6 122 63.9
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.7e-29 134.4 99 64.6
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.8e-29 132.9 142 54.9
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 4.7e-24 116.3 134 51.5
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 2.6e-22 110.5 61 88.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.8e-20 104.4 170 36.5
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.9e-17 94.4 231 29.9
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.8e-14 82.0 131 38.9
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.8e-12 77.8 168 37.5
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 5.9e-11 72.8 59 66.1
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.0e-06 57.8 85 50.6
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 9.8e-06 55.5 216 26.4


User provided reference genes

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