Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.4e-195 685.3 339 100.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 8.0e-162 573.9 339 83.5
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.8e-161 572.8 339 83.2
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.0e-160 569.3 339 82.6
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 7.5e-152 540.8 341 78.9
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.3e-148 530.0 344 76.7
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 5.2e-145 518.1 330 76.1
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 8.8e-145 517.3 342 76.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.5e-144 516.5 327 77.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 3.4e-144 515.4 328 76.2
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 7.5e-144 514.2 344 75.9
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.0e-141 506.1 328 75.0
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.3e-140 503.4 352 71.3
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 2.9e-140 502.3 342 75.1
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 3.8e-140 501.9 344 71.8
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.5e-140 501.1 346 72.5
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 4.2e-139 498.4 339 72.0
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 4.2e-139 498.4 335 72.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.2e-138 496.9 342 70.2
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.2e-136 490.3 304 83.2
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.4e-136 488.4 336 72.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 3.7e-135 485.3 342 69.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.4e-134 482.6 340 70.0
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.1e-134 482.3 329 70.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.6e-133 479.9 331 70.7
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.6e-133 479.9 326 71.5
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 3.5e-133 478.8 316 73.4
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 3.5e-133 478.8 316 73.4
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 4.5e-133 478.4 331 71.3
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 4.5e-133 478.4 329 69.9
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 7.8e-133 477.6 337 70.3
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.7e-132 476.5 323 71.2
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 2.3e-132 476.1 321 70.4
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.9e-132 475.7 340 71.2
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 3.8e-132 475.3 342 71.9
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 5.0e-132 474.9 334 71.6
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.1e-131 473.8 322 71.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.5e-131 472.6 340 69.4
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 3.3e-131 472.2 336 70.8
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 5.6e-131 471.5 339 69.3
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 7.3e-131 471.1 307 74.6
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 9.5e-131 470.7 326 70.6
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 9.5e-131 470.7 316 73.7
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.1e-130 469.5 306 74.5
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 6.1e-130 468.0 333 70.3
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.0e-129 467.2 334 70.1
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.4e-129 466.8 351 66.4
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-129 466.5 321 71.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-129 466.5 321 71.0
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 2.3e-129 466.1 326 70.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 2.3e-129 466.1 331 70.7
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 5.2e-129 464.9 333 69.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-128 463.8 326 70.2
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.5e-128 463.4 318 71.1
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.5e-128 463.4 325 69.8
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 2.6e-128 462.6 339 68.1
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 4.4e-128 461.8 360 66.9
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 7.5e-128 461.1 318 68.9
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.9e-127 459.1 318 68.9
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 6.4e-127 458.0 336 67.9
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 9.2e-126 454.1 324 68.8
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 9.2e-126 454.1 325 68.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.7e-124 449.9 326 66.6
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.3e-124 449.5 349 64.5
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.0e-124 449.1 325 68.3
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 2.5e-123 446.0 312 67.0
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 6.2e-122 441.4 328 64.9
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.5e-120 436.8 307 68.1
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 2.6e-120 436.0 376 63.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.6e-120 436.0 306 67.6
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 4.4e-120 435.3 305 73.1
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 4.4e-120 435.3 330 68.2
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 7.0e-118 427.9 318 68.2
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 9.2e-118 427.6 284 73.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.2e-117 427.2 288 73.3
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.3e-116 422.9 312 64.4
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.5e-115 419.5 306 69.0
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.1e-114 416.4 314 67.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 4.7e-114 415.2 314 65.0
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 2.3e-113 412.9 339 63.7
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 2.4e-105 386.3 287 70.0
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.6e-104 382.9 320 62.2
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.4e-102 376.3 251 74.5
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 2.4e-97 359.8 327 57.8
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 8.4e-95 351.3 224 76.8
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 9.3e-94 347.8 251 66.1
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 4.0e-89 332.4 210 75.7
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 6.9e-89 331.6 295 53.9
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.5e-88 328.9 331 52.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 5.8e-88 328.6 316 56.6
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 9.6e-83 311.2 299 52.5
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 5.8e-80 302.0 215 70.2
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.3e-79 300.8 313 47.6
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-77 293.5 316 52.5
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.4e-70 270.8 211 63.5
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 9.3e-70 268.1 203 64.5
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 5.5e-62 242.3 336 39.9
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 9.7e-59 231.5 354 36.2
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 1.3e-55 221.1 170 65.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 2.9e-55 219.9 258 44.6
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 6.5e-47 192.2 317 38.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 2.5e-46 190.3 200 50.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.9e-39 166.8 208 45.7
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.2e-37 161.4 129 62.8
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.4e-36 157.9 103 73.8
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 8.3e-34 148.7 90 76.7
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.1e-33 148.3 88 79.5
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.3e-33 146.0 110 64.5
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.5e-30 137.9 119 53.8
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 4.7e-29 132.9 343 29.2
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.8e-28 131.0 100 63.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 8.8e-28 128.6 91 72.5
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.3e-23 114.8 274 27.7
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 4.2e-22 109.8 94 56.4
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.7e-10 71.2 50 66.0
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 6.6e-07 59.3 87 36.8
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 2.5e-06 57.4 87 34.5
Mapoly0026s0052 Marchantia polymorpha HOM05D000224 ORTHO05D001489 9.5e-06 55.5 118 29.7


User provided reference genes

Program Settings