Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 1.1e-114 416.8 220 100.0
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 1.1e-90 337.0 223 84.3
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 5.3e-90 334.7 223 84.3
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 4.9e-88 328.2 222 85.1
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 2.1e-83 312.8 221 80.5
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.8e-75 285.0 222 74.3
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 5.0e-72 275.0 223 72.6
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 2.1e-70 269.6 223 70.4
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.1e-70 268.1 212 73.6
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 8.7e-69 264.2 223 70.0
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 1.1e-68 263.8 224 70.1
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 1.1e-68 263.8 224 70.1
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.5e-68 262.7 222 70.3
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 1.6e-67 260.0 227 70.9
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 3.4e-65 252.3 219 69.9
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.3e-64 250.4 247 63.6
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 8.5e-64 247.7 182 75.8
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 1.4e-63 246.9 229 67.2
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 1.9e-63 246.5 211 70.6
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 1.9e-63 246.5 247 63.2
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 2.5e-63 246.1 224 68.8
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.5e-63 246.1 182 74.7
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 5.5e-63 245.0 228 65.4
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 2.1e-62 243.0 226 67.3
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.8e-61 240.0 228 64.9
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.1e-61 238.4 182 73.6
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 1.1e-58 230.7 210 64.8
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 2.2e-56 223.0 211 65.4
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 5.0e-56 221.9 229 62.4
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 4.7e-54 215.3 232 60.3
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 8.8e-53 211.1 197 65.0
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.1e-47 194.1 250 56.0
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 7.2e-47 191.4 210 57.6
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.6e-46 190.3 210 57.6
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.1e-46 189.9 224 54.0
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 6.1e-46 188.3 180 65.6
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 1.0e-45 187.6 214 59.3
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 2.3e-45 186.4 227 55.9
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 6.7e-45 184.9 230 54.3
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 1.2e-44 184.1 224 55.4
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 1.4e-42 177.2 226 53.5
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 3.1e-42 176.0 206 56.8
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 3.1e-42 176.0 238 51.3
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 3.1e-42 176.0 232 53.9
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 1.2e-41 174.1 229 57.6
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.5e-41 172.6 158 69.6
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 2.9e-40 169.5 225 52.4
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.9e-40 169.5 233 49.4
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 3.8e-40 169.1 126 73.8
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 5.0e-40 168.7 220 57.3
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 5.0e-40 168.7 239 49.8
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 6.5e-40 168.3 237 51.5
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.1e-39 167.5 236 53.4
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.4e-39 164.5 282 43.6
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 9.4e-39 164.5 224 53.6
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 2.1e-38 163.3 233 50.6
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 2.1e-38 163.3 187 58.3
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 2.7e-38 162.9 227 51.5
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 2.7e-38 162.9 236 50.8
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.1e-38 161.8 240 52.5
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.1e-38 161.8 240 52.5
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 6.1e-38 161.8 183 58.5
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.8e-37 160.2 221 51.6
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 5.2e-37 158.7 244 51.6
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 2.6e-36 156.4 102 84.3
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.4e-36 156.0 220 50.5
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 4.4e-36 155.6 238 50.8
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 9.8e-36 154.5 223 50.7
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.3e-35 154.1 183 55.2
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.7e-35 153.7 182 58.2
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 2.8e-35 152.9 221 50.7
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.1e-34 151.0 206 52.4
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 2.4e-34 149.8 208 50.5
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.2e-33 147.5 239 51.9
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 2.7e-33 146.4 177 57.1
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 5.9e-33 145.2 223 51.1
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 5.0e-32 142.1 175 55.4
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 5.5e-31 138.7 209 50.7
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 1.2e-30 137.5 246 47.6
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 2.8e-30 136.3 236 46.2
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 3.6e-30 136.0 219 45.7
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 8.0e-30 134.8 238 42.4
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 3.0e-29 132.9 238 43.3
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 5.2e-29 132.1 195 52.3
Gohir.D11G325975 Gossypium hirsutum HOM05D004795 ORTHO05D005518 8.8e-29 131.3 98 76.5
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 8.8e-29 131.3 230 43.5
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 7.5e-28 128.3 219 45.7
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 9.8e-28 127.9 243 42.0
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 1.3e-27 127.5 229 44.1
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.7e-27 127.1 238 44.1
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 3.7e-27 125.9 238 43.7
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 6.3e-27 125.2 253 41.9
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 6.3e-27 125.2 253 41.9
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.1e-26 124.4 240 42.5
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.4e-26 124.0 244 40.6
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 2.4e-26 123.2 332 34.0
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 3.1e-26 122.9 253 40.7
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 3.1e-26 122.9 207 47.8
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.5e-25 119.0 244 41.4
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 4.5e-25 119.0 257 39.7
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.3e-24 117.5 260 38.8
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 1.3e-24 117.5 251 42.6
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 1.7e-24 117.1 238 41.2
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 8.6e-24 114.8 189 46.6
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 8.6e-24 114.8 196 48.5
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 1.1e-23 114.4 240 40.4
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.9e-23 113.6 172 50.6
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 5.6e-23 112.1 258 37.6
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 1.6e-22 110.5 239 41.0
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 2.1e-22 110.2 242 38.8
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 2.1e-22 110.2 253 39.5
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 2.8e-22 109.8 229 40.6
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 2.8e-22 109.8 190 44.7
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 3.6e-22 109.4 230 41.3
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 3.6e-22 109.4 257 38.1
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 5.2e-21 105.5 235 39.6
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 8.9e-21 104.8 247 38.9
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 1.2e-20 104.4 177 46.3
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 1.5e-20 104.0 153 47.7
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 3.4e-20 102.8 247 38.5
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 4.4e-20 102.4 248 38.7
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 4.4e-20 102.4 263 36.9
Gohir.A07G174000 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.7e-20 102.1 101 64.4
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 7.5e-20 101.7 234 40.6
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 7.5e-20 101.7 191 46.6
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 1.7e-19 100.5 179 43.6
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 6.4e-19 98.6 126 53.2
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.1e-18 97.8 236 39.8
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 1.1e-18 97.8 274 33.9
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 1.4e-18 97.4 126 52.4
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 4.1e-18 95.9 195 43.6
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 1.6e-17 94.0 226 39.8
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 4.6e-17 92.4 319 32.9
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 1.7e-16 90.5 239 36.4
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 2.3e-16 90.1 240 36.7
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 5.0e-16 89.0 301 31.9
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 6.6e-16 88.6 192 40.6
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 1.2e-14 84.3 116 50.9
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 2.8e-14 83.2 176 38.1
Actinidia15890 Actinidia chinensis HOM05D004795 ORTHO05D005518 6.2e-14 82.0 96 54.2
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 1.4e-13 80.9 182 37.4
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 1.8e-13 80.5 218 37.6
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 8.9e-13 78.2 142 41.5
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 2.6e-12 76.6 184 37.0
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 9.8e-12 74.7 152 38.8
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 9.2e-10 68.2 203 36.5
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 3.5e-09 66.2 86 50.0
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.3e-08 63.5 129 42.6
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.3e-08 63.5 129 42.6
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 8.1e-06 55.1 101 44.6


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