Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.6e-110 402.9 222 100.0
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 4.3e-100 368.2 194 92.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 6.9e-98 360.9 194 90.7
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 3.8e-96 355.1 193 89.6
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.8e-88 328.6 195 83.1
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 6.1e-78 294.7 186 78.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 8.8e-77 290.8 179 79.3
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 3.3e-76 288.9 174 80.5
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 7.5e-76 287.7 193 75.6
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.8e-75 285.8 194 73.7
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.4e-74 283.5 191 71.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.0e-74 281.2 183 74.9
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 7.0e-74 281.2 173 78.6
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.2e-73 280.4 139 95.7
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.2e-73 280.4 193 71.0
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 1.2e-73 280.4 194 73.2
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.0e-73 279.6 190 72.6
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 3.5e-73 278.9 175 76.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.3e-72 276.9 177 75.1
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.7e-72 276.6 191 73.3
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 3.2e-71 272.3 196 70.4
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 4.2e-71 271.9 191 70.2
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 7.2e-71 271.2 191 70.2
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 9.4e-71 270.8 179 71.5
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.2e-70 270.4 181 72.4
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 4.7e-70 268.5 195 70.3
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 8.0e-70 267.7 183 70.5
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 8.0e-70 267.7 194 69.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 8.0e-70 267.7 183 71.6
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.0e-69 267.3 189 72.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.8e-69 266.5 201 66.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.8e-69 266.5 200 66.5
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 1.8e-69 266.5 181 71.8
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 2.3e-69 266.2 181 70.7
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 3.0e-69 265.8 196 68.4
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 3.0e-69 265.8 199 67.8
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 4.0e-69 265.4 175 73.7
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 5.2e-69 265.0 184 70.1
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.0e-68 263.1 181 72.4
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 3.4e-68 262.3 181 66.9
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 4.4e-68 261.9 186 72.6
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 7.5e-68 261.2 175 72.0
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 4.8e-67 258.5 177 71.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.8e-67 258.5 169 74.0
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 6.3e-67 258.1 180 68.9
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.1e-66 257.3 193 66.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.8e-66 256.5 176 69.9
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 4.1e-66 255.4 193 66.8
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 7.0e-66 254.6 177 71.2
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 9.1e-66 254.2 206 65.0
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 9.1e-66 254.2 192 69.3
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.6e-65 253.4 193 65.8
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.6e-65 253.4 189 65.6
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 2.0e-65 253.1 200 64.5
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 4.5e-65 251.9 176 72.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 5.9e-65 251.5 192 66.1
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.9e-65 251.5 192 66.1
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.9e-65 251.5 192 66.1
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 7.7e-65 251.1 194 65.5
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 1.3e-64 250.4 190 64.7
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.8e-64 248.8 156 77.6
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 6.5e-64 248.1 138 84.8
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.9e-63 246.5 153 77.8
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 2.5e-63 246.1 194 64.4
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 3.2e-63 245.7 185 64.3
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 3.2e-63 245.7 169 68.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 5.5e-63 245.0 170 68.2
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.6e-62 242.3 175 64.6
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 4.7e-62 241.9 159 75.5
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 6.1e-62 241.5 156 76.9
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 8.0e-62 241.1 217 60.4
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 2.3e-61 239.6 193 62.2
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 5.2e-61 238.4 183 63.4
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 5.2e-61 238.4 160 71.9
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.2e-60 237.3 166 66.9
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.5e-60 236.9 137 79.6
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 2.0e-60 236.5 179 64.8
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 1.3e-59 233.8 182 62.6
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 2.8e-59 232.6 191 59.7
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 7.0e-58 228.0 163 69.3
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 2.7e-57 226.1 211 58.3
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 7.7e-57 224.6 173 64.7
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.5e-55 220.3 194 58.2
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 1.2e-54 217.2 152 71.1
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.6e-54 216.9 177 66.1
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.6e-54 216.9 195 58.5
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 2.1e-54 216.5 170 64.1
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.1e-54 216.5 170 64.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.0e-54 214.5 163 64.4
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.2e-52 210.7 136 69.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.4e-52 209.1 184 59.8
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 1.2e-46 190.7 113 74.3
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.8e-45 186.8 180 54.4
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.3e-43 180.6 200 52.5
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.0e-40 169.5 179 51.4
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.6e-40 168.3 140 62.1
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 6.6e-40 168.3 168 50.6
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.5e-39 167.2 205 49.3
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.2e-35 153.3 84 79.8
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 2.4e-34 149.8 143 51.0
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.6e-33 147.1 162 50.6
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.1e-29 132.9 67 85.1
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.0e-24 117.9 84 63.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 3.3e-23 112.8 91 67.0
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 9.9e-20 101.3 125 48.8
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.2e-18 95.9 53 79.2
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 5.4e-18 95.5 63 63.5
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.0e-16 89.7 83 59.0
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.3e-14 84.3 62 59.7
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.4e-12 76.3 68 60.3
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.1e-09 67.0 37 73.0
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 4.3e-07 59.3 94 35.1


User provided reference genes

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