Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G101600 Theobroma cacao HOM05D000003 ORTHO05D002259 3.9e-54 214.5 108 100.0
Thecc.09G263100 Theobroma cacao HOM05D000003 ORTHO05D002259 2.1e-15 85.9 76 51.3
COL.COLO4_22651 Corchorus olitorius HOM05D000003 ORTHO05D002259 1.8e-14 82.8 77 50.6
Thecc.01G176600 Theobroma cacao HOM05D000003 ORTHO05D002259 2.6e-13 79.0 100 42.0
Thecc.04G115600 Theobroma cacao HOM05D000003 ORTHO05D002259 4.4e-13 78.2 99 42.4
COL.COLO4_27741 Corchorus olitorius HOM05D000003 ORTHO05D002259 1.3e-12 76.6 77 49.4
Thecc.04G103900 Theobroma cacao HOM05D000003 ORTHO05D002259 3.7e-12 75.1 78 48.7
COL.COLO4_36005 Corchorus olitorius HOM05D000003 ORTHO05D002259 6.3e-12 74.3 77 46.8
Thecc.06G083800 Theobroma cacao HOM05D000101 ORTHO05D000089 8.2e-12 73.9 78 44.9
Thecc.05G093100 Theobroma cacao HOM05D000003 ORTHO05D002259 5.3e-11 71.2 75 49.3
Thecc.09G159600 Theobroma cacao HOM05D000003 ORTHO05D002259 1.6e-10 69.7 77 42.9
Thecc.06G100900 Theobroma cacao HOM05D000003 ORTHO05D002259 1.0e-09 67.0 74 45.9
COL.COLO4_32709 Corchorus olitorius HOM05D000003 ORTHO05D002259 2.2e-09 65.9 73 47.9
Thecc.04G121700 Theobroma cacao HOM05D000003 ORTHO05D002259 2.2e-09 65.9 69 46.4
COL.COLO4_05921 Corchorus olitorius HOM05D008457 ORTHO05D029079 3.8e-09 65.1 78 39.7
Thecc.02G166000 Theobroma cacao HOM05D000003 ORTHO05D002259 3.8e-09 65.1 76 40.8
Thecc.05G094900 Theobroma cacao HOM05D000003 ORTHO05D002259 3.8e-09 65.1 83 37.3
Thecc.03G016300 Theobroma cacao HOM05D000003 ORTHO05D002259 5.0e-09 64.7 76 39.5
Atru.chr10.981 Acer truncatum HOM05D000003 ORTHO05D002259 8.5e-09 63.9 77 39.0
Atru.chr13.1845 Acer truncatum HOM05D000003 ORTHO05D002259 8.5e-09 63.9 77 39.0
Thecc.04G117300 Theobroma cacao HOM05D000003 ORTHO05D002259 3.2e-08 62.0 74 41.9
Hma1.2p1_1754F.1_g300945 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 1.6e-07 59.7 78 46.2
Thecc.02G298600 Theobroma cacao HOM05D029474 ORTHO05D002259 2.1e-07 59.3 82 35.4
Thecc.09G168800 Theobroma cacao HOM05D000003 ORTHO05D002259 2.1e-07 59.3 76 42.1
Thecc.09G083400 Theobroma cacao HOM05D014430 ORTHO05D002259 2.7e-07 58.9 62 43.5
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.7e-07 58.9 84 41.7
Thecc.K0005100 Theobroma cacao HOM05D000003 ORTHO05D002259 6.1e-07 57.8 77 37.7
Atru.chr7.902 Acer truncatum HOM05D000003 ORTHO05D002259 1.4e-06 56.6 77 39.0
Thecc.03G002300 Theobroma cacao HOM05D000003 ORTHO05D002259 1.4e-06 56.6 52 55.8
Atru.chr6.600 Acer truncatum HOM05D000003 ORTHO05D002259 2.3e-06 55.8 77 39.0
Thecc.01G258600 Theobroma cacao HOM05D000003 ORTHO05D002259 3.0e-06 55.5 84 38.1
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 4.0e-06 55.1 77 41.6
Hma1.2p1_0353F.1_g133190 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 4.0e-06 55.1 79 45.6
Atru.chr1.3836 Acer truncatum HOM05D000003 ORTHO05D002259 5.2e-06 54.7 77 39.0
Sc04g0007350 Simmondsia chinensis HOM05D000003 ORTHO05D002259 5.2e-06 54.7 75 41.3
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 6.7e-06 54.3 77 37.7
Thecc.09G040100 Theobroma cacao HOM05D000682 ORTHO05D000510 8.8e-06 53.9 104 35.6


User provided reference genes

Program Settings