Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G101500 Theobroma cacao HOM05D010186 ORTHO05D012215 2.4e-60 235.3 120 100.0
COL.COLO4_38000 Corchorus olitorius HOM05D010186 ORTHO05D012215 5.2e-31 137.9 99 71.7
COL.COLO4_37998 Corchorus olitorius HOM05D010186 ORTHO05D012215 1.8e-23 112.8 124 58.1
COL.COLO4_37996 Corchorus olitorius HOM05D010186 ORTHO05D012215 4.8e-21 104.8 119 51.3
Thecc.04G100300 Theobroma cacao HOM05D031087 ORTHO05D029116 9.8e-14 80.5 114 45.6
COL.COLO4_37999 Corchorus olitorius HOM05D018458 ORTHO05D020515 8.3e-13 77.4 123 42.3
Gohir.D07G188700 Gossypium hirsutum HOM05D010186 ORTHO05D012215 1.4e-12 76.6 101 43.6
Gorai.001G209500 Gossypium raimondii HOM05D010186 ORTHO05D012215 1.4e-12 76.6 101 43.6
Gohir.A07G182000 Gossypium hirsutum HOM05D010186 ORTHO05D012215 1.8e-12 76.3 101 43.6
Thecc.04G101400 Theobroma cacao HOM05D018458 ORTHO05D020515 3.1e-12 75.5 122 45.1
Gohir.D07G085400 Gossypium hirsutum HOM05D018458 ORTHO05D020515 2.7e-11 72.4 118 41.5
Gorai.001G091200 Gossypium raimondii HOM05D018458 ORTHO05D020515 1.0e-10 70.5 118 40.7
Gorai.001G209000 Gossypium raimondii HOM05D010186 ORTHO05D012215 1.0e-10 70.5 100 43.0
Cfa007674 Carpinus fangiana HOM05D011846 ORTHO05D013294 1.1e-09 67.0 101 40.6
Haze_14406 Corylus avellana HOM05D011846 ORTHO05D013294 1.1e-09 67.0 109 40.4
Gohir.D07G188300 Gossypium hirsutum HOM05D010186 ORTHO05D012215 2.5e-09 65.9 101 41.6
Cfa007673 Carpinus fangiana HOM05D011846 ORTHO05D013294 7.2e-09 64.3 108 38.9
CiPaw.04G053600 Carya illinoinensis HOM05D011846 ORTHO05D013294 1.2e-08 63.5 66 54.5
Thecc.04G098300 Theobroma cacao HOM05D016890 ORTHO05D019066 3.6e-08 62.0 113 38.9
Haze_14408 Corylus avellana HOM05D011846 ORTHO05D013294 4.7e-08 61.6 113 37.2
Gohir.1Z049551 Gossypium hirsutum HOM05D010186 ORTHO05D012215 4.7e-08 61.6 102 38.2
Gohir.1Z049751 Gossypium hirsutum HOM05D010186 ORTHO05D012215 4.7e-08 61.6 102 38.2
Gohir.A07G080200 Gossypium hirsutum HOM05D010186 ORTHO05D012215 4.7e-08 61.6 102 38.2
Cfa021252 Carpinus fangiana HOM05D011846 ORTHO05D013294 6.1e-08 61.2 112 35.7
Gorai.001G091700 Gossypium raimondii HOM05D010186 ORTHO05D012215 6.1e-08 61.2 76 44.7
Gohir.D07G085733 Gossypium hirsutum HOM05D010186 ORTHO05D012215 8.0e-08 60.8 94 38.3
COL.COLO4_37985 Corchorus olitorius HOM05D031087 ORTHO05D029116 1.8e-07 59.7 114 39.5
Thecc.04G099100 Theobroma cacao HOM05D016890 ORTHO05D019066 2.3e-07 59.3 113 38.1
Gohir.A07G181600 Gossypium hirsutum HOM05D033328 ORTHO05D036064 5.2e-07 58.2 113 38.1
Gohir.D07G085600 Gossypium hirsutum HOM05D010186 ORTHO05D012215 6.8e-07 57.8 81 40.7
Gohir.A07G079900 Gossypium hirsutum HOM05D010186 ORTHO05D012215 1.2e-06 57.0 65 44.6
Gorai.001G091500 Gossypium raimondii HOM05D010186 ORTHO05D012215 1.5e-06 56.6 72 44.4
QL08p036748 Quercus lobata HOM05D062516 ORTHO05D012215 1.5e-06 56.6 79 43.0
Gohir.D07G188000 Gossypium hirsutum HOM05D033328 ORTHO05D036064 2.6e-06 55.8 107 37.4
QL08p036822 Quercus lobata HOM05D062516 ORTHO05D012215 3.4e-06 55.5 78 42.3
CiPaw.04G053500 Carya illinoinensis HOM05D011846 ORTHO05D013294 7.5e-06 54.3 113 37.2


User provided reference genes

Program Settings