Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G098600 Theobroma cacao HOM05D012781 ORTHO05D014605 5.2e-63 244.2 121 100.0
Thecc.04G099400 Theobroma cacao HOM05D012781 ORTHO05D014605 4.5e-59 231.1 121 95.0
Thecc.04G099000 Theobroma cacao HOM05D012781 ORTHO05D014605 1.1e-57 226.5 121 92.6
Thecc.08G202000 Theobroma cacao HOM05D012781 ORTHO05D014605 7.0e-28 127.5 116 62.1
Gohir.1Z049651 Gossypium hirsutum HOM05D012781 ORTHO05D014605 2.6e-22 109.0 120 49.2
Gohir.A07G080100 Gossypium hirsutum HOM05D012781 ORTHO05D014605 2.6e-22 109.0 120 49.2
Gorai.001G091800 Gossypium raimondii HOM05D012781 ORTHO05D014605 9.8e-22 107.1 120 49.2
Gohir.A07G080300 Gossypium hirsutum HOM05D012781 ORTHO05D014605 2.1e-16 89.4 124 43.5
Gohir.D07G085700 Gossypium hirsutum HOM05D012781 ORTHO05D014605 1.1e-15 87.0 124 42.7
Gorai.001G091600 Gossypium raimondii HOM05D012781 ORTHO05D014605 1.1e-15 87.0 124 42.7
COL.COLO4_37976 Corchorus olitorius HOM05D012781 ORTHO05D014605 3.4e-14 82.0 113 50.4
Gohir.A07G182400 Gossypium hirsutum HOM05D018624 ORTHO05D022807 7.1e-12 74.3 107 46.7
Gohir.A07G182500 Gossypium hirsutum HOM05D018624 ORTHO05D022807 2.7e-11 72.4 111 45.0
COL.COLO4_37977 Corchorus olitorius HOM05D012781 ORTHO05D014605 6.0e-11 71.2 97 57.7
COL.COLO4_37979 Corchorus olitorius HOM05D018624 ORTHO05D014605 7.8e-11 70.9 78 52.6
Gohir.D07G085766 Gossypium hirsutum HOM05D012781 ORTHO05D014605 2.8e-08 62.4 72 47.2
Gorai.001G210900 Gossypium raimondii HOM05D018624 ORTHO05D022807 2.8e-08 62.4 97 45.4
Thecc.04G098800 Theobroma cacao HOM05D016890 ORTHO05D019066 3.1e-07 58.9 98 40.8
Thecc.04G098300 Theobroma cacao HOM05D016890 ORTHO05D019066 4.0e-07 58.5 98 40.8
Thecc.04G099100 Theobroma cacao HOM05D016890 ORTHO05D019066 6.8e-07 57.8 95 42.1
CiPaw.03G121700 Carya illinoinensis HOM05D016567 ORTHO05D016916 9.9e-06 53.9 85 43.5
Gorai.001G210400 Gossypium raimondii HOM05D018624 ORTHO05D022807 9.9e-06 53.9 94 45.7


User provided reference genes

Program Settings