Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 3.5e-36 154.5 78 100.0
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 8.0e-33 143.3 78 96.2
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 8.5e-27 123.2 80 85.0
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 6.8e-24 113.6 80 80.0
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 2.6e-23 111.7 81 80.2
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 9.1e-21 103.2 78 69.2
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 9.1e-21 103.2 78 69.2
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 1.0e-19 99.8 75 70.7
COL.COLO4_10319 Corchorus olitorius HOM05D008206 ORTHO05D010320 5.0e-19 97.4 51 90.2
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.5e-18 95.1 78 65.4
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 2.5e-18 95.1 79 68.4
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 5.5e-18 94.0 80 66.2
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 1.2e-17 92.8 75 66.7
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 3.6e-17 91.3 77 66.2
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 1.0e-16 89.7 76 63.2
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 1.4e-16 89.4 80 58.8
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 1.4e-16 89.4 79 62.0
Manes.02G047166 Manihot esculenta HOM05D008206 ORTHO05D010320 1.5e-15 85.9 81 60.5
Gohir.D12G128666 Gossypium hirsutum HOM05D008206 ORTHO05D010320 7.5e-15 83.6 77 61.0
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.7e-14 82.4 80 58.8
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 1.7e-14 82.4 78 57.7
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 2.2e-14 82.0 78 53.8
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 2.2e-14 82.0 80 58.8
Gohir.D11G074200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 4.9e-14 80.9 110 48.2
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 1.2e-12 76.3 78 50.0
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 51.3
FAN02G1369 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 52.6
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 51.3
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 51.3
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 51.3
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.0e-12 75.5 78 51.3
Potri.004G122800 Populus trichocarpa HOM05D008206 ORTHO05D010320 5.9e-12 73.9 82 53.7
arahy.Tifrunner.gnm1.ann1.BDSN0J Arachis hypogaea HOM05D008206 ORTHO05D010320 1.9e-10 68.9 77 55.8
Sabra17G0074600 Salix brachista HOM05D008206 ORTHO05D010320 1.9e-10 68.9 82 50.0
Manes.01G092200 Manihot esculenta HOM05D008206 ORTHO05D010320 2.5e-10 68.6 80 53.8
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 2.8e-09 65.1 87 51.7
CSS0033569 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 4.7e-09 64.3 83 55.4
Psat3g197800 Pisum sativum HOM05D008206 ORTHO05D010320 4.7e-09 64.3 76 50.0
CSS0025041 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 8.0e-09 63.5 83 55.4
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 1.4e-08 62.8 77 46.8
Gohir.A11G070100 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.3e-08 62.0 59 64.4
Phvul.008G037100 Phaseolus vulgaris HOM05D008206 ORTHO05D010320 3.1e-08 61.6 76 52.6
CDE02G3745 Ceratophyllum demersum HOM05D002107 ORTHO05D002067 4.0e-08 61.2 82 46.3
Actinidia26223 Actinidia chinensis HOM05D008206 ORTHO05D010320 6.8e-08 60.5 78 53.8
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 6.8e-08 60.5 82 46.3
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 6.8e-08 60.5 76 48.7
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 8.9e-08 60.1 79 54.4
Potri.017G084700 Populus trichocarpa HOM05D008206 ORTHO05D010320 1.2e-07 59.7 78 47.4
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 2.0e-07 58.9 76 44.7
Medtr7g010980 Medicago truncatula HOM05D008206 ORTHO05D010320 5.8e-07 57.4 77 49.4
ClCG10G015200 Citrullus lanatus HOM05D008206 ORTHO05D010320 7.5e-07 57.0 80 42.5
Migut.K01319 Erythranthe guttata HOM05D008206 ORTHO05D010320 1.3e-06 56.2 74 45.9
Eucgr.J01355 Eucalyptus grandis HOM05D008206 ORTHO05D010320 1.7e-06 55.8 73 38.4
Hund13203 Selenicereus undatus HOM05D031025 ORTHO05D026498 3.7e-06 54.7 78 47.4


User provided reference genes

Program Settings