Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 1.2e-286 989.2 496 100.0
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 4.9e-245 850.9 503 84.7
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.3e-237 826.2 506 82.2
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.7e-232 808.1 506 81.2
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 5.5e-220 767.7 461 82.9
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.7e-192 676.4 495 71.1
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.7e-189 666.4 492 68.1
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 1.5e-188 663.3 495 69.5
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 7.2e-188 661.0 491 69.2
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 3.0e-186 655.6 492 67.1
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 4.0e-186 655.2 496 66.9
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.8e-184 649.0 492 66.3
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 8.3e-184 647.5 497 66.2
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 2.3e-181 639.4 488 66.4
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 8.6e-181 637.5 482 66.8
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 7.3e-180 634.4 491 68.0
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 9.8e-177 624.0 487 65.9
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 3.2e-175 619.0 485 65.2
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.9e-172 609.8 494 64.0
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 7.3e-172 607.8 490 63.7
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 6.2e-171 604.7 485 64.1
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 1.8e-170 603.2 453 66.4
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 8.6e-165 584.3 488 60.9
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 8.6e-165 584.3 562 56.2
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.9e-164 583.2 490 59.4
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 3.6e-163 578.9 502 60.6
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 6.2e-163 578.2 498 62.0
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 8.1e-163 577.8 533 57.8
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.0e-161 573.2 497 60.4
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.7e-160 570.1 484 57.9
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 8.3e-160 567.8 589 54.2
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 3.2e-159 565.8 494 61.5
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 3.2e-159 565.8 496 59.7
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 2.7e-158 562.8 489 58.5
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 4.6e-158 562.0 485 58.8
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 5.1e-157 558.5 458 64.8
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.5e-156 557.0 458 64.6
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 4.3e-156 555.4 506 57.5
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 3.6e-155 552.4 487 59.5
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 2.0e-153 546.6 506 59.1
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 7.6e-153 544.7 497 59.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.9e-152 542.0 470 57.7
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.9e-151 540.0 497 59.2
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.9e-151 540.0 490 59.2
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 5.4e-151 538.5 487 57.9
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.2e-150 537.3 500 56.2
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.2e-150 537.3 483 56.3
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 2.7e-150 536.2 490 59.2
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.3e-149 533.9 478 58.8
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.9e-148 530.0 496 56.9
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.1e-147 526.6 457 62.4
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.2e-145 520.8 478 56.5
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.4e-145 519.2 491 55.4
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 1.7e-144 516.9 481 57.2
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 2.9e-144 516.2 489 55.4
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 4.9e-144 515.4 494 56.1
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 4.9e-144 515.4 507 54.8
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 8.4e-144 514.6 362 72.7
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 3.2e-143 512.7 486 55.1
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 3.5e-142 509.2 497 54.9
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 1.0e-141 507.7 574 50.2
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 3.9e-141 505.8 498 53.6
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 5.6e-140 501.9 479 55.7
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 4.0e-138 495.7 373 68.6
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 6.9e-138 495.0 518 52.5
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 1.3e-136 490.7 495 53.3
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 2.9e-136 489.6 509 52.5
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 1.3e-133 480.7 492 51.6
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.0e-133 479.6 405 62.7
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 5.1e-133 478.8 473 52.9
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 1.1e-132 477.6 494 52.4
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.1e-132 477.6 493 51.9
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 6.2e-131 471.9 467 52.0
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 6.9e-122 441.8 487 50.1
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 9.0e-122 441.4 345 65.5
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 2.2e-120 436.8 498 47.8
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 7.1e-119 431.8 406 58.6
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.9e-116 423.7 426 52.1
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 5.3e-114 415.6 397 55.4
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 3.8e-112 409.5 496 45.0
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 1.9e-111 407.1 497 44.7
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 5.9e-105 385.6 518 45.9
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 1.8e-98 364.0 354 56.5
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.4e-97 359.8 561 41.7
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 2.1e-94 350.5 501 42.7
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 1.2e-89 334.7 316 56.3
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.6e-81 307.8 288 56.9
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 9.8e-76 288.5 483 39.1
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.6e-70 271.2 218 64.2
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 1.6e-65 254.6 419 37.5
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 3.9e-56 223.4 240 55.0
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.7e-48 198.0 198 50.5
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 1.2e-46 191.8 180 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 8.4e-27 125.9 177 36.7
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 3.9e-24 117.1 215 39.5
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 4.8e-22 110.2 127 44.9
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 174 37.9
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 174 37.9
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 72 76.4
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 3.1e-21 107.5 109 51.4
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.6e-20 104.4 107 51.4
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 2.2e-19 101.3 128 44.5
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 2.7e-17 94.4 154 39.0
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 1.3e-16 92.0 182 33.0
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.3e-16 91.3 72 61.1
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 1.9e-15 88.2 78 59.0
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 5.6e-15 86.7 125 42.4
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 8.4e-11 72.8 51 60.8
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.1e-10 72.4 74 48.6
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 4.6e-09 67.0 297 27.9
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 1.0e-08 65.9 39 76.9


User provided reference genes

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