Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.0e-235 819.7 413 100.0
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 7.6e-175 617.5 404 76.5
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.4e-173 613.2 404 76.0
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.3e-166 590.1 396 72.0
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 9.4e-165 583.9 395 70.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.1e-162 577.0 407 72.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 6.9e-160 567.8 397 69.3
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.0e-159 566.2 397 70.0
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 3.8e-158 562.0 397 69.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 6.1e-156 554.7 377 71.1
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 2.3e-155 552.7 405 66.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.9e-155 552.0 421 64.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 6.7e-155 551.2 393 66.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 2.0e-154 549.7 396 66.4
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 7.4e-154 547.7 388 66.5
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.3e-153 547.0 398 67.6
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.7e-153 546.6 376 68.4
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.7e-153 546.6 390 69.2
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.2e-153 546.2 399 65.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 8.2e-153 544.3 376 70.7
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.1e-152 543.9 382 67.8
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.8e-152 543.1 405 63.7
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 7.0e-152 541.2 407 65.6
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.1e-152 540.8 382 69.6
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.6e-151 540.0 397 65.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.6e-151 539.3 393 64.4
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.5e-151 538.9 399 63.7
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.0e-150 537.3 417 63.8
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-150 536.6 393 63.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 2.2e-150 536.2 403 64.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.8e-150 535.4 383 66.3
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 5.0e-150 535.0 401 62.8
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 8.5e-150 534.3 380 68.2
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 2.5e-149 532.7 409 64.8
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 4.2e-149 531.9 376 66.8
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 7.2e-149 531.2 406 65.0
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.2e-148 530.4 403 64.5
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.6e-148 530.0 400 62.8
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.1e-148 529.6 405 64.4
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.1e-148 529.6 409 64.5
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.7e-148 529.3 370 67.3
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 3.6e-148 528.9 413 64.4
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.2e-147 525.0 387 64.3
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 6.7e-147 524.6 401 63.6
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 6.7e-147 524.6 391 63.9
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.0e-146 523.1 402 62.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.2e-145 519.6 415 62.7
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 2.2e-145 519.6 367 65.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.8e-145 519.2 391 64.2
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 4.8e-145 518.5 394 64.7
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 4.1e-144 515.4 377 63.9
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.2e-143 513.8 397 65.5
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.0e-143 513.1 381 64.8
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 4.5e-143 511.9 411 61.3
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.7e-142 510.0 375 66.9
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.7e-142 510.0 391 63.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 2.9e-142 509.2 391 61.9
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.8e-142 508.8 431 59.6
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.9e-141 506.5 380 62.6
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 4.7e-140 501.9 405 63.5
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 4.7e-140 501.9 405 63.5
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 4.0e-139 498.8 405 63.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.6e-138 496.1 376 66.2
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 3.4e-138 495.7 334 70.1
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 9.8e-138 494.2 431 59.6
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.2e-137 493.0 374 62.0
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 2.2e-137 493.0 406 60.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.8e-137 492.7 398 60.1
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.7e-135 486.1 372 64.5
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.0e-134 484.2 442 57.7
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 9.4e-133 477.6 370 61.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.2e-130 470.7 415 56.9
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-130 470.3 402 59.5
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 4.4e-130 468.8 390 59.0
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 4.4e-130 468.8 313 70.6
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.3e-126 457.2 373 58.7
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.7e-126 456.8 385 57.7
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.7e-119 433.0 343 63.6
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.5e-119 432.6 296 68.2
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.6e-119 432.2 421 52.3
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.3e-118 429.9 289 69.9
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 6.6e-118 428.3 396 53.5
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 3.6e-116 422.5 286 67.8
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 5.2e-115 418.7 377 54.4
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.9e-110 402.5 304 62.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.1e-107 394.4 295 62.7
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.3e-101 372.9 312 56.4
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 4.6e-95 352.4 250 74.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.5e-93 347.4 287 63.8
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 9.9e-90 334.7 275 62.5
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.4e-88 330.1 232 68.1
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 7.6e-82 308.5 244 64.3
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.2e-80 303.1 388 44.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.7e-79 300.1 283 54.1
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 3.1e-67 260.0 215 58.6
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 5.8e-66 255.8 201 59.7
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.7e-65 254.2 385 37.4
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.4e-59 234.6 158 70.9
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 3.8e-49 199.9 155 63.2
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.5e-45 188.0 389 32.1
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.9e-41 173.7 142 60.6
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.8e-35 154.5 148 54.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.1e-35 153.7 153 52.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 1.4e-27 128.3 101 63.4
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.3e-27 126.3 109 61.5
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 2.3e-22 110.9 357 26.9
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.2e-21 108.6 82 62.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.8e-20 104.0 372 27.2
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.8e-20 103.2 92 56.5
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 1.4e-19 101.7 417 27.1
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 5.4e-19 99.8 344 27.0
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 3.8e-17 93.6 74 59.5
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 8.5e-17 92.4 74 62.2
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 6.8e-14 82.8 68 64.7
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.8e-12 77.4 71 46.5
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.6e-10 71.6 111 38.7
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 8.6e-09 65.9 39 82.1
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.3e-08 63.9 43 67.4


User provided reference genes

Program Settings