Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.4e-144 516.2 246 100.0
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 7.9e-111 404.1 245 78.8
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 4.1e-107 391.7 242 74.8
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.3e-105 386.7 242 73.6
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.2e-103 380.2 242 72.3
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 3.0e-102 375.6 247 72.1
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.0e-65 254.2 239 53.1
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.1e-63 246.5 235 51.1
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.0e-62 244.2 237 48.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 3.7e-60 235.7 233 48.9
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 8.3e-60 234.6 239 51.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 1.8e-59 233.4 239 51.5
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.2e-58 230.7 239 49.8
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.7e-57 226.9 238 49.6
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.7e-57 226.9 238 49.6
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 7.5e-53 211.5 241 44.8
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 5.4e-51 205.3 217 48.8
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 9.2e-51 204.5 202 48.5
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.3e-49 199.9 238 46.6
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.2e-46 188.7 222 43.2
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.0e-45 186.8 222 42.8
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.8e-45 185.3 227 41.0
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 9.8e-45 184.5 242 42.6
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.3e-44 184.1 219 41.1
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.7e-44 182.6 232 42.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 4.1e-43 179.1 239 41.8
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 2.3e-41 173.3 239 41.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 6.6e-41 171.8 212 39.6
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.5e-40 169.9 241 36.1
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 7.3e-40 168.3 219 39.3
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.7e-39 165.6 233 40.3
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.2e-37 161.0 203 40.4
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 5.8e-37 158.7 216 39.4
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 7.6e-37 158.3 196 44.9
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 3.8e-36 156.0 204 41.7
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 8.4e-36 154.8 178 46.1
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.6e-34 150.6 168 48.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.6e-33 144.8 182 44.0
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.5e-32 144.1 157 49.7
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 3.3e-32 142.9 206 40.3
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 2.8e-31 139.8 227 34.4
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 8.1e-31 138.3 196 40.3
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.1e-30 137.9 200 39.5
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.4e-30 137.5 157 45.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.4e-30 136.7 180 41.7
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 4.0e-30 136.0 157 47.8
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.6e-29 133.3 240 35.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 3.4e-29 132.9 241 34.9
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 5.8e-29 132.1 240 35.4
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.9e-28 129.0 123 52.0
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 7.8e-26 121.7 192 38.5
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.0e-25 121.3 127 46.5
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 5.6e-24 115.5 129 44.2
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 8.1e-23 111.7 157 43.9
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 2.4e-22 110.2 155 39.4
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 5.3e-22 109.0 162 42.6
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.2e-21 107.8 226 31.0
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.3e-20 104.4 134 39.6
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.2e-20 103.6 116 42.2
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.4e-19 100.1 235 30.2
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 5.6e-16 89.0 182 33.5
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 2.1e-15 87.0 103 46.6
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.6e-13 80.1 124 37.9
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.9e-11 73.9 127 33.1
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.8e-09 67.4 121 32.2
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 7.4e-08 62.0 41 61.0
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 9.6e-08 61.6 146 31.5


User provided reference genes

Program Settings