Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 4.3e-108 394.8 220 100.0
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.1e-83 312.8 220 79.1
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 2.5e-79 299.3 212 79.7
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.1e-77 291.6 221 74.2
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 6.5e-72 274.6 218 71.1
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.1e-71 273.9 221 70.1
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.4e-71 273.5 209 72.7
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.9e-69 265.4 223 69.1
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 5.1e-69 265.0 209 70.8
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 2.5e-68 262.7 209 70.3
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 4.3e-68 261.9 213 70.0
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 2.8e-67 259.2 224 67.4
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 4.8e-67 258.5 221 67.9
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 4.8e-67 258.5 212 69.8
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 8.2e-67 257.7 222 68.9
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.4e-66 256.9 199 73.4
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 2.6e-65 252.7 201 72.1
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 2.6e-65 252.7 199 72.9
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.7e-64 250.0 202 70.8
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.2e-64 249.6 221 65.6
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 2.2e-64 249.6 203 69.5
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 2.2e-64 249.6 221 66.5
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 2.9e-64 249.2 205 67.8
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 2.9e-64 249.2 210 68.1
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 3.8e-64 248.8 197 73.1
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.4e-63 246.9 209 68.9
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.4e-63 244.2 219 64.8
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.6e-62 243.4 221 64.7
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.1e-62 243.0 200 66.5
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 6.1e-62 241.5 224 63.4
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 7.9e-62 241.1 279 55.6
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.4e-61 240.4 216 68.1
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.8e-61 240.0 194 70.1
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 3.0e-61 239.2 239 61.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 3.3e-60 235.7 200 67.5
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 4.4e-60 235.3 208 64.9
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 9.7e-60 234.2 179 74.3
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 1.3e-59 233.8 203 68.0
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 2.2e-59 233.0 219 62.1
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 2.8e-59 232.6 193 69.4
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 3.7e-59 232.3 213 66.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 4.8e-59 231.9 201 66.7
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 4.1e-58 228.8 194 67.0
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 5.3e-58 228.4 166 78.3
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.0e-57 226.5 221 62.4
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 1.0e-56 224.2 207 61.8
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.3e-56 223.8 211 61.6
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 5.0e-56 221.9 195 65.6
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 6.5e-56 221.5 196 66.8
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 6.5e-56 221.5 197 63.5
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 1.1e-55 220.7 206 61.2
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 2.5e-55 219.5 188 67.0
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 4.2e-55 218.8 192 66.1
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 4.2e-55 218.8 194 66.0
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 7.2e-55 218.0 250 54.8
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 7.2e-55 218.0 196 63.3
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 9.4e-55 217.6 235 58.7
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.2e-54 217.2 195 64.6
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 1.6e-54 216.9 221 60.2
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 2.7e-54 216.1 204 60.8
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 1.4e-53 213.8 248 51.6
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.4e-53 213.8 189 67.2
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 3.0e-53 212.6 188 64.4
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 2.6e-52 209.5 219 57.1
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 4.4e-52 208.8 189 65.6
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 5.7e-52 208.4 223 57.0
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 9.7e-52 207.6 200 62.5
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 1.3e-51 207.2 193 58.5
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 1.7e-51 206.8 201 58.2
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 4.8e-51 205.3 194 58.2
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 6.3e-51 204.9 195 57.9
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 3.1e-50 202.6 197 58.9
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.6e-49 200.3 195 58.5
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.0e-49 199.9 197 58.9
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 4.5e-49 198.7 187 61.5
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.3e-48 197.2 195 57.4
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.7e-48 196.8 197 61.4
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 3.8e-48 195.7 216 55.6
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 5.0e-48 195.3 203 59.6
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 5.0e-48 195.3 176 67.0
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.2e-47 192.2 211 56.4
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 4.2e-47 192.2 199 56.8
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 5.5e-47 191.8 219 52.5
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 7.2e-47 191.4 194 58.2
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 7.2e-47 191.4 188 61.2
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 1.2e-46 190.7 183 61.2
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 1.2e-46 190.7 183 61.2
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 3.6e-46 189.1 188 59.0
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 3.6e-46 189.1 188 59.0
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 3.6e-46 189.1 191 56.0
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 1.0e-45 187.6 213 55.9
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.8e-45 186.8 211 57.8
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 2.3e-45 186.4 188 58.5
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 2.3e-45 186.4 187 57.2
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 2.3e-45 186.4 194 57.7
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 4.0e-45 185.7 203 53.7
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.2e-44 184.1 195 57.4
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 5.7e-44 181.8 210 54.3
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 7.5e-44 181.4 196 55.6
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 1.7e-43 180.3 188 55.3
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 4.8e-43 178.7 215 52.6
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 6.3e-43 178.3 196 56.1
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 8.2e-43 177.9 191 53.9
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.1e-42 177.6 187 57.2
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 3.1e-42 176.0 192 57.3
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.0e-41 173.3 193 53.9
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 1.3e-40 170.6 214 51.9
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 5.0e-40 168.7 188 55.9
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 8.5e-40 167.9 217 51.2
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 1.5e-39 167.2 149 67.8
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 4.2e-39 165.6 220 51.8
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 7.2e-39 164.9 195 55.4
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 1.2e-38 164.1 192 55.7
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 3.6e-38 162.5 159 59.7
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 8.0e-38 161.4 215 50.2
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 5.2e-37 158.7 188 55.3
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 8.8e-37 157.9 190 51.6
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 8.8e-37 157.9 190 51.6
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 8.8e-37 157.9 190 51.6
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 2.6e-36 156.4 194 52.6
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 6.3e-35 151.8 268 42.9
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 5.9e-33 145.2 103 83.5
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 1.3e-32 144.1 150 59.3
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 5.0e-32 142.1 187 50.3
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 6.5e-32 141.7 127 63.8
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 3.2e-31 139.4 187 49.2
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 7.2e-31 138.3 204 43.6
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.8e-30 136.3 195 49.2
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 6.1e-30 135.2 169 52.1
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 7.5e-28 128.3 132 60.6
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 9.8e-28 127.9 116 65.5
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 3.1e-26 122.9 93 73.1
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.6e-25 120.6 127 57.5
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.9e-24 116.3 119 59.7
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 3.4e-20 102.8 120 56.7
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 5.7e-20 102.1 156 39.7
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.4e-18 97.4 100 55.0
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 2.4e-18 96.7 148 40.5
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.6e-17 94.0 85 68.2
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 7.8e-17 91.7 91 53.8
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.9e-15 87.0 109 48.6
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.1e-14 83.6 149 37.6
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.4e-13 80.9 70 55.7
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 3.1e-13 79.7 92 52.2
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.5e-12 77.4 126 36.5
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 3.4e-12 76.3 81 60.5
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 7.5e-12 75.1 114 45.6
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 1.9e-10 70.5 71 54.9
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 1.3e-08 64.3 56 48.2
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.3e-08 64.3 47 61.7


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