Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 5.6e-201 704.1 370 100.0
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.8e-151 539.7 362 80.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.5e-148 529.3 370 78.6
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.1e-139 499.6 331 80.1
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 6.1e-139 498.0 331 79.8
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.8e-138 496.5 374 72.2
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 4.3e-137 491.9 331 78.5
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.7e-109 400.2 371 60.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.0e-109 398.7 371 59.8
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 6.5e-109 398.3 371 59.3
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.5e-109 397.9 369 60.2
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 1.0e-106 391.0 327 63.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-106 390.6 369 58.8
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.0e-106 389.4 365 57.3
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 4.4e-105 385.6 349 60.7
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 5.7e-105 385.2 365 58.4
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.7e-104 383.6 332 60.8
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 2.0e-102 376.7 363 57.3
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 4.5e-102 375.6 378 55.3
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.3e-101 374.0 374 56.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 4.2e-100 369.0 345 58.6
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.1e-99 366.7 362 55.0
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.0e-98 364.4 363 56.7
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 6.8e-98 361.7 361 57.1
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 2.4e-95 353.2 361 55.4
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 4.2e-92 342.4 369 52.3
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 2.1e-91 340.1 355 53.0
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 6.1e-91 338.6 319 59.2
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 4.4e-89 332.4 363 50.1
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 5.7e-89 332.0 370 50.5
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 8.3e-88 328.2 368 52.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 4.1e-87 325.9 362 51.4
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 5.4e-87 325.5 360 52.2
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 7.0e-87 325.1 380 51.1
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 4.6e-86 322.4 367 49.3
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 8.6e-85 318.2 366 50.3
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 3.3e-84 316.2 366 49.7
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 6.2e-83 312.0 368 49.7
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.4e-82 310.8 366 49.2
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.8e-82 310.5 365 49.0
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.0e-81 307.0 381 49.1
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.7e-80 303.9 275 62.2
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.7e-80 303.9 366 48.1
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 2.9e-80 303.1 361 48.2
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.4e-79 300.8 362 48.6
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.0e-77 294.7 381 47.8
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.3e-77 294.3 358 47.8
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.1e-76 291.2 324 52.8
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 2.5e-76 290.0 353 49.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 3.6e-75 286.2 360 46.9
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.7e-75 285.8 329 48.9
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.8e-74 283.9 368 45.9
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.2e-73 281.2 354 49.2
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 4.4e-73 279.3 337 46.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 9.8e-73 278.1 314 48.1
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.7e-72 276.2 365 43.0
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.7e-72 276.2 338 48.8
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.4e-72 275.4 329 49.2
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 6.4e-72 275.4 358 44.7
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 9.2e-71 271.6 266 57.5
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 2.1e-70 270.4 272 56.6
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 6.0e-70 268.9 272 56.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.3e-69 267.7 324 47.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.1e-68 264.6 363 42.7
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.6e-67 259.6 326 46.0
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 4.7e-67 259.2 333 44.1
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.1e-66 258.1 338 43.8
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.0e-65 253.8 351 44.2
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.9e-63 247.3 360 40.3
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 7.1e-63 245.4 304 49.3
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.1e-62 243.8 290 48.6
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 6.6e-61 238.8 307 47.2
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.5e-60 236.9 358 42.7
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 2.5e-60 236.9 276 46.7
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 8.9e-58 228.4 283 47.7
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.5e-57 227.6 238 57.1
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.2e-56 223.8 346 43.1
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.2e-56 223.8 346 43.1
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.6e-54 217.6 206 58.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-54 216.9 257 49.0
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 8.7e-53 211.8 216 54.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 7.3e-52 208.8 216 55.6
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 9.6e-52 208.4 341 41.3
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 8.1e-51 205.3 386 36.0
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 3.4e-49 199.9 372 37.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 1.7e-45 187.6 365 37.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.3e-44 183.3 343 36.2
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 4.3e-44 183.0 365 35.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 2.1e-43 180.6 296 40.9
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 4.8e-43 179.5 351 36.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 5.3e-42 176.0 353 36.0
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 9.0e-42 175.3 358 35.5
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.5e-41 174.5 353 36.3
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 8.4e-40 168.7 353 35.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.4e-39 167.2 351 35.3
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.4e-39 167.2 351 35.3
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 5.5e-39 166.0 351 35.0
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 9.3e-39 165.2 179 52.0
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-36 158.3 355 34.6
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.5e-36 157.1 355 34.6
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 4.5e-33 146.4 363 32.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 4.9e-32 142.9 120 61.7
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.1e-30 137.5 293 34.8
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 3.9e-29 133.3 287 34.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 6.9e-26 122.5 272 32.0
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 9.0e-26 122.1 348 31.9
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.2e-25 121.7 210 41.9
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 2.6e-25 120.6 339 30.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.5e-22 110.2 347 29.7
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 1.0e-21 108.6 315 29.5
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-21 107.8 116 47.4
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-21 107.8 116 47.4
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.8e-21 107.8 268 32.1
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.5e-20 104.8 306 29.4
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.8e-13 81.3 141 36.9
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 2.0e-12 77.8 72 50.0
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 5.7e-12 76.3 80 50.0
Pp3c16_7350 Physcomitrium patens HOM05D006619 ORTHO05D008351 2.5e-07 60.8 274 27.4


User provided reference genes

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