Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 1.4e-99 366.3 189 100.0
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 7.5e-69 264.2 158 85.4
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 9.8e-69 263.8 185 75.7
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 2.3e-65 252.7 171 77.2
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 2.1e-63 246.1 171 76.0
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 1.2e-61 240.4 159 78.0
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 4.0e-54 215.3 170 67.1
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 9.2e-51 204.1 161 65.2
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 2.7e-50 202.6 178 62.9
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 1.0e-49 200.7 159 66.7
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 1.3e-49 200.3 170 61.2
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.1e-48 197.2 164 62.8
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 3.3e-48 195.7 167 58.7
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.2e-47 193.7 169 57.4
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 2.1e-47 193.0 161 65.2
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 3.6e-47 192.2 162 64.8
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 4.7e-47 191.8 159 62.9
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.8e-46 189.9 160 63.1
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 2.4e-46 189.5 167 56.9
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 2.4e-46 189.5 161 61.5
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 8.9e-46 187.6 163 58.9
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 1.2e-45 187.2 161 59.6
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 1.2e-45 187.2 160 60.0
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 2.0e-45 186.4 160 62.5
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 2.6e-45 186.0 163 58.3
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 5.8e-45 184.9 160 60.0
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 9.9e-45 184.1 162 62.3
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 1.1e-43 180.6 172 59.9
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 1.9e-43 179.9 157 61.1
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 1.6e-42 176.8 150 61.3
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 3.5e-42 175.6 158 58.2
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 4.6e-42 175.3 161 56.5
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.3e-41 173.7 163 57.1
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 1.7e-41 173.3 161 56.5
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 1.7e-41 173.3 161 55.9
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 3.0e-41 172.6 158 60.8
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 8.7e-41 171.0 167 53.3
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 1.1e-40 170.6 175 49.1
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.9e-40 169.9 159 56.0
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 1.9e-40 169.9 161 57.1
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 5.6e-40 168.3 175 49.7
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 5.6e-40 168.3 171 52.6
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 7.3e-40 167.9 181 48.6
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 9.6e-40 167.5 151 58.3
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 9.6e-40 167.5 169 53.3
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.2e-39 167.2 167 52.1
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 2.1e-39 166.4 174 50.0
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 2.8e-39 166.0 159 54.7
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 2.8e-39 166.0 170 50.6
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 4.7e-39 165.2 165 53.3
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 6.2e-39 164.9 149 59.7
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 1.8e-38 163.3 162 50.0
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 4.0e-38 162.2 161 53.4
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 5.3e-38 161.8 161 53.4
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 9.0e-38 161.0 158 51.9
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 1.2e-37 160.6 161 52.8
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 1.2e-37 160.6 152 55.9
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 2.0e-37 159.8 167 49.1
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 2.6e-37 159.5 163 52.1
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 2.6e-37 159.5 161 52.2
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 3.4e-37 159.1 150 54.0
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 5.8e-37 158.3 186 45.7
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 7.6e-37 157.9 163 50.3
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 7.6e-37 157.9 161 51.6
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 3.8e-36 155.6 144 53.5
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 6.4e-36 154.8 151 51.7
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 1.1e-35 154.1 153 52.3
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 7.1e-35 151.4 161 49.7
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 7.1e-35 151.4 170 48.2
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 9.3e-35 151.0 202 43.1
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 1.2e-34 150.6 158 50.0
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 1.6e-34 150.2 159 51.6
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 2.3e-33 146.4 185 43.2
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 3.0e-33 146.0 160 50.6
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 3.3e-32 142.5 165 46.7
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 4.3e-32 142.1 78 93.6
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 7.3e-32 141.4 156 48.1
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 2.8e-31 139.4 150 49.3
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 4.0e-30 135.6 183 44.3
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 5.3e-30 135.2 146 45.9
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 9.0e-30 134.4 218 39.9
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 1.2e-29 134.0 173 42.8
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.7e-28 130.2 93 72.0
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 4.9e-28 128.6 118 54.2
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 4.9e-28 128.6 160 45.6
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 6.4e-28 128.3 170 44.1
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 3.0e-25 119.4 165 37.6
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.1e-24 117.5 114 52.6
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 1.9e-24 116.7 172 39.0
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 4.3e-24 115.5 128 47.7
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 2.0e-21 106.7 177 39.5
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 3.4e-21 105.9 103 54.4
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 1.1e-16 90.9 100 54.0
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 1.6e-15 87.0 74 60.8
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 1.4e-14 84.0 89 50.6
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 4.0e-14 82.4 86 52.3
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 4.0e-14 82.4 121 40.5
Gohir.A08G148800 Gossypium hirsutum HOM05D036757 ORTHO05D048069 9.0e-14 81.3 109 49.5
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 2.6e-13 79.7 130 43.1
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 7.6e-13 78.2 82 57.3
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 3.8e-12 75.9 141 31.9
Gorai.004G177100 Gossypium raimondii HOM05D036757 ORTHO05D048069 7.1e-11 71.6 127 42.5
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 1.0e-09 67.8 49 65.3
SEGI_16341 Sequoiadendron giganteum HOM05D007367 ORTHO05D008866 1.1e-08 64.3 80 41.2
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 9.7e-08 61.2 52 61.5
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-07 59.3 60 51.7
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 8.2e-07 58.2 68 50.0


User provided reference genes

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