Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 1.7e-69 266.2 164 100.0
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.7e-56 223.0 162 79.6
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.0e-55 217.6 162 85.2
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 9.1e-55 217.2 165 73.3
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 6.1e-51 204.5 158 83.5
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 4.1e-47 191.8 164 67.7
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 3.0e-37 159.1 175 65.7
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 6.6e-37 157.9 171 57.9
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.5e-36 156.8 169 66.9
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.3e-34 149.4 175 56.6
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.1e-34 149.1 169 55.6
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.2e-33 147.1 165 53.9
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 1.5e-33 146.7 170 53.5
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 1.5e-33 146.7 170 55.9
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.5e-33 146.7 176 61.4
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 2.9e-32 142.5 164 54.3
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 3.7e-32 142.1 171 62.6
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 6.4e-32 141.4 182 62.1
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.1e-31 140.6 178 49.4
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 3.2e-31 139.0 165 54.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 5.4e-31 138.3 172 64.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 9.2e-31 137.5 178 60.7
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.2e-30 137.1 170 53.5
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.6e-30 135.2 170 50.6
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.0e-29 134.0 175 57.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.3e-29 132.9 164 54.9
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 3.0e-29 132.5 168 51.8
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.9e-29 132.1 165 52.7
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 5.0e-29 131.7 216 44.9
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 6.6e-29 131.3 164 58.5
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.6e-29 131.3 165 59.4
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.6e-29 131.3 164 58.5
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.6e-29 131.0 165 59.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.5e-28 130.2 170 59.4
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.5e-28 130.2 142 56.3
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.5e-28 129.4 164 57.3
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 4.3e-28 128.6 171 45.0
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.8e-27 125.9 171 46.2
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.8e-27 125.9 171 46.2
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.8e-27 125.9 171 56.7
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 3.6e-27 125.6 175 43.4
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 6.2e-27 124.8 168 48.2
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.4e-26 123.6 177 44.1
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.4e-26 123.6 177 44.1
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 2.3e-26 122.9 175 44.0
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 3.1e-26 122.5 165 51.5
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 4.0e-26 122.1 176 59.1
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 5.2e-26 121.7 184 46.7
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 5.2e-26 121.7 170 51.2
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 6.8e-26 121.3 177 47.5
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 6.8e-26 121.3 164 50.6
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.2e-25 120.6 173 44.5
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.2e-25 120.6 172 44.8
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.5e-25 120.2 164 48.8
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 2.0e-25 119.8 178 42.7
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.4e-25 118.6 179 46.9
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 4.4e-25 118.6 175 45.1
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 4.4e-25 118.6 172 43.0
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 4.4e-25 118.6 172 43.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 5.8e-25 118.2 168 48.2
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 7.5e-25 117.9 178 44.4
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 2.9e-24 115.9 170 47.1
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 3.7e-24 115.5 175 42.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 4.9e-24 115.2 178 42.7
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 4.9e-24 115.2 172 42.4
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 4.9e-24 115.2 178 42.7
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 4.9e-24 115.2 178 46.6
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.1e-23 114.0 174 44.8
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 3.2e-23 112.5 167 45.5
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.1e-23 112.1 114 59.6
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 7.1e-23 111.3 174 44.3
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 7.1e-23 111.3 175 46.3
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.2e-22 110.5 169 46.2
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.2e-22 110.5 183 42.6
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.6e-22 110.2 178 45.5
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.1e-22 109.8 183 41.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 2.1e-22 109.8 135 51.9
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 2.7e-22 109.4 129 60.5
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 3.0e-21 105.9 141 53.2
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 6.6e-21 104.8 137 48.2
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.6e-21 104.8 173 45.1
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 6.6e-21 104.8 174 46.0
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.1e-20 104.0 164 43.9
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.9e-20 103.2 130 46.9
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.5e-20 102.8 171 46.2
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.3e-20 102.1 164 40.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.3e-20 102.1 164 40.2
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 4.3e-20 102.1 170 42.4
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 4.3e-20 102.1 141 61.7
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 4.3e-20 102.1 165 44.8
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 7.3e-20 101.3 95 56.8
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 8.1e-19 97.8 169 40.8
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.1e-18 97.4 53 88.7
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 5.2e-18 95.1 138 44.2
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.7e-16 90.1 91 52.7
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 3.8e-16 89.0 91 51.6
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.4e-15 86.3 144 50.0
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 4.2e-15 85.5 151 37.7
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 3.5e-14 82.4 250 34.0
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 7.8e-14 81.3 161 37.9
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 7.8e-14 81.3 139 41.7
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.0e-13 80.9 56 75.0
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.5e-12 77.0 73 57.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 9.6e-12 74.3 56 62.5
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.2e-11 73.9 56 62.5
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 4.0e-10 68.9 150 46.7
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 1.2e-09 67.4 63 55.6
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 5.8e-09 65.1 133 49.6
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 2.9e-08 62.8 56 53.6
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.2e-06 57.4 190 32.6


User provided reference genes

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