Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 0.0e+00 1110.9 586 100.0
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 4.6e-282 974.2 585 88.2
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.0e-281 973.0 587 88.4
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.3e-281 971.8 587 88.2
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.0e-281 970.7 587 88.1
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.3e-228 796.6 587 73.6
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 3.6e-226 788.5 586 72.4
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 3.9e-225 785.0 602 72.4
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 5.1e-225 784.6 601 72.4
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.6e-223 779.6 581 71.6
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.6e-223 779.6 589 71.1
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 1.8e-222 776.2 613 69.2
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 2.9e-220 768.8 586 70.1
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 2.7e-218 762.3 592 70.8
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 7.9e-218 760.8 561 71.5
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 2.4e-214 749.2 598 68.9
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 9.1e-214 747.3 591 68.5
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.2e-213 746.9 593 69.0
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.6e-213 745.7 580 69.1
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 1.1e-211 740.3 608 67.4
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 2.5e-211 739.2 582 68.7
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.1e-210 736.1 595 68.2
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.7e-210 734.9 594 68.9
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 7.9e-210 734.2 642 64.2
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 3.9e-209 731.9 586 67.7
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 9.7e-208 727.2 591 67.3
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 1.3e-207 726.9 589 66.0
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.8e-207 725.7 536 72.8
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.7e-207 725.3 589 68.1
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.2e-205 720.3 595 67.6
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 1.3e-204 716.8 587 65.4
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.7e-204 716.5 586 67.7
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.8e-204 715.3 587 65.2
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 4.2e-203 711.8 524 70.4
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 9.4e-203 710.7 577 66.9
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.2e-202 710.3 574 67.8
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 1.6e-202 709.9 587 65.6
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 6.1e-202 708.0 577 67.9
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 4.0e-201 705.3 536 69.6
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 1.2e-200 703.7 506 72.3
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 2.0e-200 703.0 506 72.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 2.6e-200 702.6 588 64.8
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 3.3e-200 702.2 500 72.4
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 7.5e-200 701.0 507 71.8
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.2e-199 699.5 594 64.5
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 8.2e-199 697.6 506 72.1
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.1e-198 697.2 506 71.3
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.2e-197 693.7 500 71.2
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.2e-197 693.7 542 69.6
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 4.5e-197 691.8 500 70.4
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 5.9e-197 691.4 513 69.4
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 6.5e-196 688.0 522 68.8
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 9.4e-195 684.1 591 63.5
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.6e-194 683.3 512 69.5
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 2.1e-194 682.9 507 70.4
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 4.7e-194 681.8 594 62.6
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.3e-193 679.5 593 64.9
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 2.3e-193 679.5 596 63.3
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 5.2e-193 678.3 516 68.6
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 9.8e-192 674.1 569 65.6
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.2e-191 672.9 593 63.6
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 2.2e-191 672.9 445 78.0
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.8e-190 669.8 543 64.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 4.5e-189 665.2 482 71.2
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.7e-188 663.3 494 68.0
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 3.8e-188 662.1 594 62.8
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.8e-185 653.3 526 66.5
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.8e-185 653.3 570 62.3
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.3e-183 647.1 586 63.1
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.4e-182 643.7 476 70.4
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 1.8e-182 643.3 612 59.0
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.7e-181 639.4 614 59.9
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 3.5e-181 639.0 597 60.5
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 3.3e-179 632.5 659 57.2
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.1e-178 629.8 635 58.6
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 1.8e-177 626.7 463 69.1
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 9.8e-176 620.9 522 63.6
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 6.4e-175 618.2 477 69.4
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 3.5e-173 612.5 606 57.1
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 2.9e-167 592.8 548 62.6
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 6.6e-164 581.6 564 59.0
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 1.1e-161 574.3 480 64.4
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.4e-161 573.9 496 62.1
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 3.1e-161 572.8 506 58.5
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 2.4e-158 563.1 517 61.1
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.4e-153 547.4 592 54.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 2.2e-151 540.0 534 57.7
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 8.9e-145 518.1 644 51.7
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.9e-139 500.4 325 78.2
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 9.9e-136 488.0 325 76.0
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 3.8e-135 486.1 509 50.5
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 2.3e-132 476.9 553 48.6
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 2.1e-130 470.3 492 49.6
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 5.1e-124 449.1 537 46.7
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.9e-115 420.6 406 54.4
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 1.3e-103 381.3 520 44.6
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.2e-88 331.6 230 76.1
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 4.7e-69 266.5 265 58.1
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.0e-63 248.8 284 54.2
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 1.9e-62 244.6 541 32.7
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 7.5e-59 232.6 204 58.8
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 2.7e-56 224.2 288 49.7
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.7e-56 224.2 199 54.3
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.4e-49 201.1 148 73.0
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 4.3e-46 190.3 253 47.8
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.9e-42 177.6 216 46.8
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.7e-40 171.0 251 47.8
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 8.6e-39 166.0 172 56.4
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.9e-31 140.6 119 61.3
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 1.3e-23 115.5 71 90.1
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.3e-18 99.0 66 80.3
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 6.0e-08 63.5 117 35.9
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 1.3e-07 62.4 117 35.0


User provided reference genes

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