Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G280900 Theobroma cacao HOM05D000111 ORTHO05D001334 3.6e-109 398.3 205 100.0
TAR629G1416 Trochodendron aralioides HOM05D000111 ORTHO05D000134 5.9e-19 98.6 162 40.7
TAR629G2288 Trochodendron aralioides HOM05D000111 ORTHO05D001334 8.6e-18 94.7 162 38.9
TAR375G0947 Trochodendron aralioides HOM05D000111 ORTHO05D001334 9.5e-17 91.3 172 36.0
Cfa012214 Carpinus fangiana HOM05D000111 ORTHO05D000134 5.2e-15 85.5 169 40.2
TAR636G2154 Trochodendron aralioides HOM05D000111 ORTHO05D001475 1.8e-12 77.0 163 33.7
Aqoxy1G02488 Aquilegia oxysepala HOM05D000111 ORTHO05D000134 3.8e-10 69.3 158 36.7
TAR623G0920 Trochodendron aralioides HOM05D000111 ORTHO05D001475 5.0e-10 68.9 167 37.1
GSVIVG01019801001 Vitis vinifera HOM05D000111 ORTHO05D001334 5.0e-10 68.9 178 31.5
Duzib147G0312 Durio zibethinus HOM05D000111 ORTHO05D000134 6.6e-10 68.6 180 30.6
vmacro22619 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 8.6e-10 68.2 160 35.6
Aqoxy1G01091 Aquilegia oxysepala HOM05D000111 ORTHO05D000134 1.1e-09 67.8 155 35.5
Aqoxy7G00535 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.1e-09 67.8 162 31.5
Thecc.03G281100 Theobroma cacao HOM05D000111 ORTHO05D001334 1.1e-09 67.8 90 47.8
GSVIVG01026923001 Vitis vinifera HOM05D000111 ORTHO05D001334 1.9e-09 67.0 159 35.8
TAR383G0372 Trochodendron aralioides HOM05D000111 ORTHO05D001334 2.5e-09 66.6 157 35.7
TAR375G1024 Trochodendron aralioides HOM05D000111 ORTHO05D000134 3.3e-09 66.2 168 35.1
Sp6g05770 Schrenkiella parvula HOM05D000111 ORTHO05D001334 7.3e-09 65.1 165 32.7
Nitab4.5_0010198g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.5e-09 64.7 144 36.1
TAR375G0416 Trochodendron aralioides HOM05D000111 ORTHO05D001334 9.5e-09 64.7 160 33.1
TAR383G0905 Trochodendron aralioides HOM05D000111 ORTHO05D000134 9.5e-09 64.7 133 36.1
GSVIVG01026925001 Vitis vinifera HOM05D000111 ORTHO05D001475 9.5e-09 64.7 165 32.1
Aqoxy7G00552 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.2e-08 64.3 144 34.7
Aqoxy1G02489 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.6e-08 63.9 165 33.9
Sp6g05760 Schrenkiella parvula HOM05D000111 ORTHO05D001334 2.1e-08 63.5 161 34.2
EL10Ac3g05732 Beta vulgaris HOM05D000111 ORTHO05D000134 2.8e-08 63.2 179 33.0
PSO478G0890 Papaver somniferum HOM05D000111 ORTHO05D001475 2.8e-08 63.2 135 35.6
Solyc08g080790.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.6e-08 62.8 145 30.3
Aqoxy3G03203 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 6.1e-08 62.0 165 32.7
Nitab4.5_0000395g0040 Nicotiana tabacum HOM05D000111 ORTHO05D001334 6.1e-08 62.0 136 36.0
Oeu060719.2 Olea europaea HOM05D000111 ORTHO05D000134 8.0e-08 61.6 166 33.1
Rhsim02G0221400 Rhododendron simsii HOM05D000111 ORTHO05D001334 8.0e-08 61.6 172 34.3
TAR279G0002 Trochodendron aralioides HOM05D000111 ORTHO05D001475 8.0e-08 61.6 165 34.5
TAR383G0060 Trochodendron aralioides HOM05D000111 ORTHO05D001475 8.0e-08 61.6 165 32.1
GSVIVG01026924001 Vitis vinifera HOM05D000111 ORTHO05D000134 8.0e-08 61.6 144 36.1
Haze_08796 Corylus avellana HOM05D000111 ORTHO05D000134 1.0e-07 61.2 143 32.2
Aqoxy3G02363 Aquilegia oxysepala HOM05D000111 ORTHO05D001334 1.4e-07 60.8 168 29.8
TWI81G0621 Tripterygium wilfordii HOM05D000111 ORTHO05D001334 1.4e-07 60.8 139 34.5
Aqoxy1G03021 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.8e-07 60.5 154 30.5
Nitab4.5_0005621g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.8e-07 60.5 185 28.6
THA.LOC104825020 Tarenaya hassleriana HOM05D000111 ORTHO05D001334 1.8e-07 60.5 145 35.9
Psat1g114920 Pisum sativum HOM05D000111 ORTHO05D001475 2.3e-07 60.1 147 38.1
TAR374G0273 Trochodendron aralioides HOM05D000111 ORTHO05D001334 2.3e-07 60.1 71 47.9
COL.COLO4_31479 Corchorus olitorius HOM05D000111 ORTHO05D001475 3.0e-07 59.7 136 31.6
Gohir.A07G207500 Gossypium hirsutum HOM05D000111 ORTHO05D000134 3.0e-07 59.7 180 28.9
HanXRQChr12g0361671 Helianthus annuus HOM05D000111 ORTHO05D000134 3.0e-07 59.7 122 36.9
AL6G46442 Arabidopsis lyrata HOM05D000111 ORTHO05D001334 4.0e-07 59.3 134 37.3
HanXRQChr12g0363631 Helianthus annuus HOM05D000111 ORTHO05D000134 4.0e-07 59.3 133 35.3
MBI16_g28440_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 4.0e-07 59.3 131 32.1
TAR629G0307 Trochodendron aralioides HOM05D000111 ORTHO05D000134 4.0e-07 59.3 166 30.1
AUR62016052 Chenopodium quinoa HOM05D000111 ORTHO05D001475 5.2e-07 58.9 169 31.4
Nitab4.5_0005621g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.2e-07 58.9 136 34.6
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 5.2e-07 58.9 149 33.6
CDE06G2085 Ceratophyllum demersum HOM05D000111 ORTHO05D000134 6.8e-07 58.5 120 40.0
COL.COLO4_03707 Corchorus olitorius HOM05D000111 ORTHO05D001475 6.8e-07 58.5 116 35.3
Glyma.14G142700 Glycine max HOM05D000111 ORTHO05D001475 6.8e-07 58.5 136 35.3
LjContig00141g0003602 Lotus japonicus HOM05D000111 ORTHO05D001475 6.8e-07 58.5 159 35.2
MBI16_g31345_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 6.8e-07 58.5 132 33.3
Nitab4.5_0006136g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 6.8e-07 58.5 142 36.6
Peaxi162Scf01409g00018 Petunia axillaris HOM05D000111 ORTHO05D001334 6.8e-07 58.5 144 34.0
Rhsim02G0177500 Rhododendron simsii HOM05D000111 ORTHO05D001334 6.8e-07 58.5 161 30.4
THA.LOC104814340 Tarenaya hassleriana HOM05D000111 ORTHO05D001334 6.8e-07 58.5 163 34.4
vmacro08453 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 6.8e-07 58.5 164 34.1
Aqoxy4G02615 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 8.9e-07 58.2 152 33.6
HanXRQChr12g0363341 Helianthus annuus HOM05D000111 ORTHO05D000134 8.9e-07 58.2 133 35.3
Actinidia14541 Actinidia chinensis HOM05D000111 ORTHO05D001334 1.2e-06 57.8 151 34.4
Thhalv10029495m.g Eutrema salsugineum HOM05D000111 ORTHO05D001334 1.2e-06 57.8 59 49.2
Peaxi162Scf00302g01424 Petunia axillaris HOM05D000111 ORTHO05D001334 1.2e-06 57.8 145 32.4
Solyc08g080820.1 Solanum lycopersicum HOM05D000111 ORTHO05D001334 1.2e-06 57.8 137 30.7
CANSAT54G1610 Cannabis sativa HOM05D000111 ORTHO05D001334 1.5e-06 57.4 143 34.3
Gorai.001G241400 Gossypium raimondii HOM05D000111 ORTHO05D000134 1.5e-06 57.4 161 28.0
Nitab4.5_0002270g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 1.5e-06 57.4 173 29.5
Sopen08g029120 Solanum pennellii HOM05D000111 ORTHO05D001334 1.5e-06 57.4 123 31.7
GSVIVG01019797001 Vitis vinifera HOM05D000111 ORTHO05D001334 1.5e-06 57.4 46 52.2
Aqoxy3G02369 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 2.0e-06 57.0 160 33.1
Aqoxy3G02767 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 2.0e-06 57.0 157 33.1
Aqoxy7G03878 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 2.0e-06 57.0 178 29.2
PSO170G2852 Papaver somniferum HOM05D000111 ORTHO05D001334 2.0e-06 57.0 150 35.3
PSO761G0523 Papaver somniferum HOM05D000111 ORTHO05D001475 2.0e-06 57.0 183 35.0
Solyc08g080810.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 2.0e-06 57.0 149 31.5
TAR383G0571 Trochodendron aralioides HOM05D000111 ORTHO05D001475 2.0e-06 57.0 136 32.4
Thhalv10001464m.g Eutrema salsugineum HOM05D000111 ORTHO05D000134 2.6e-06 56.6 160 31.9
PSO832G2796 Papaver somniferum HOM05D000111 ORTHO05D001334 2.6e-06 56.6 114 33.3
Psat1g015360 Pisum sativum HOM05D000111 ORTHO05D001475 2.6e-06 56.6 147 37.4
Rhsim02G0167100 Rhododendron simsii HOM05D000111 ORTHO05D001334 2.6e-06 56.6 143 33.6
A09p65350 Brassica napus HOM05D000111 ORTHO05D001334 3.4e-06 56.2 152 30.9
BraA09t41881Z Brassica rapa HOM05D000111 ORTHO05D001334 3.4e-06 56.2 152 30.9
Eucgr.D02193 Eucalyptus grandis HOM05D000111 ORTHO05D001475 3.4e-06 56.2 136 34.6
Gohir.D07G213500 Gossypium hirsutum HOM05D000111 ORTHO05D000134 3.4e-06 56.2 156 31.4
Nitab4.5_0002908g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 3.4e-06 56.2 141 38.3
Peaxi162Scf00714g00123 Petunia axillaris HOM05D000111 ORTHO05D001334 3.4e-06 56.2 172 30.8
Rhsim02G0222000 Rhododendron simsii HOM05D000111 ORTHO05D001334 3.4e-06 56.2 170 31.8
Solyc08g080700.3 Solanum lycopersicum HOM05D000111 ORTHO05D001334 3.4e-06 56.2 125 35.2
TAR383G0880 Trochodendron aralioides HOM05D000111 ORTHO05D001475 3.4e-06 56.2 157 33.8
BcaC07g41864 Brassica carinata HOM05D000111 ORTHO05D001334 4.4e-06 55.8 156 30.1
CARHR139370 Cardamine hirsuta HOM05D000111 ORTHO05D000134 4.4e-06 55.8 153 32.0
HanXRQChr12g0363351 Helianthus annuus HOM05D000111 ORTHO05D000134 4.4e-06 55.8 137 34.3
Nitab4.5_0003154g0020 Nicotiana tabacum HOM05D000111 ORTHO05D001334 4.4e-06 55.8 160 30.0
PSO384G1350 Papaver somniferum HOM05D000111 ORTHO05D001475 4.4e-06 55.8 128 39.1
PSO832G4119 Papaver somniferum HOM05D000111 ORTHO05D001475 4.4e-06 55.8 114 32.5
TAR383G0784 Trochodendron aralioides HOM05D000111 ORTHO05D001475 4.4e-06 55.8 157 34.4
Aqoxy4G03015 Aquilegia oxysepala HOM05D000111 ORTHO05D007071 5.7e-06 55.5 50 56.0
CARHR187200 Cardamine hirsuta HOM05D000111 ORTHO05D000134 5.7e-06 55.5 131 32.1
PSO832G1822 Papaver somniferum HOM05D000111 ORTHO05D001475 5.7e-06 55.5 114 32.5
Peaxi162Scf00288g00311 Petunia axillaris HOM05D000111 ORTHO05D001334 5.7e-06 55.5 136 33.8
QL04p023339 Quercus lobata HOM05D000111 ORTHO05D001475 5.7e-06 55.5 177 29.9
Sopen08g029010 Solanum pennellii HOM05D000111 ORTHO05D001334 5.7e-06 55.5 126 34.1
Cfa001134 Carpinus fangiana HOM05D000111 ORTHO05D001334 7.5e-06 55.1 171 31.0
CDE02G3663 Ceratophyllum demersum HOM05D000111 ORTHO05D001475 7.5e-06 55.1 50 56.0
CsaV3_3G001790 Cucumis sativus L. HOM05D000111 ORTHO05D000134 7.5e-06 55.1 170 32.9
CsaV3_4G017520 Cucumis sativus L. HOM05D000111 ORTHO05D000134 7.5e-06 55.1 180 29.4
Eucgr.E00564 Eucalyptus grandis HOM05D000111 ORTHO05D001334 7.5e-06 55.1 158 29.7
Glyma.14G145300 Glycine max HOM05D000111 ORTHO05D001475 7.5e-06 55.1 142 35.2
LjContig00141g0024849 Lotus japonicus HOM05D000111 ORTHO05D001475 7.5e-06 55.1 146 30.8
Nitab4.5_0000612g0010 Nicotiana tabacum HOM05D000111 ORTHO05D001334 7.5e-06 55.1 141 33.3
Ah.02g116760 Amaranthus hybridus HOM05D000111 ORTHO05D001334 9.8e-06 54.7 146 31.5
Aqoxy3G00603 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 9.8e-06 54.7 136 31.6
LjContig00141g0005447 Lotus japonicus HOM05D000111 ORTHO05D001475 9.8e-06 54.7 145 31.0
Medtr3g104070 Medicago truncatula HOM05D000111 ORTHO05D000134 9.8e-06 54.7 159 29.6
Nitab4.5_0005621g0130 Nicotiana tabacum HOM05D000111 ORTHO05D001334 9.8e-06 54.7 167 31.7
Oeu023368.1 Olea europaea HOM05D000111 ORTHO05D000134 9.8e-06 54.7 181 30.4
PSO675G8233 Papaver somniferum HOM05D000111 ORTHO05D001334 9.8e-06 54.7 142 31.7
PSO765G0123 Papaver somniferum HOM05D000111 ORTHO05D001475 9.8e-06 54.7 163 30.1
Peaxi162Scf00822g00048 Petunia axillaris HOM05D000111 ORTHO05D001334 9.8e-06 54.7 156 33.3
Peaxi162Scf01062g00004 Petunia axillaris HOM05D000111 ORTHO05D001334 9.8e-06 54.7 135 34.1
Peaxi162Scf01409g00017 Petunia axillaris HOM05D000111 ORTHO05D001334 9.8e-06 54.7 140 29.3
Potri.019G007000 Populus trichocarpa HOM05D000111 ORTHO05D001334 9.8e-06 54.7 144 34.7
TAR664G0002 Trochodendron aralioides HOM05D000111 ORTHO05D001475 9.8e-06 54.7 157 33.8


User provided reference genes

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