Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G273000 Theobroma cacao HOM05D008129 ORTHO05D010232 2.4e-95 352.1 168 100.0
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 2.9e-40 169.1 153 60.8
Gohir.D03G153200 Gossypium hirsutum HOM05D008129 ORTHO05D010232 6.1e-38 161.4 173 54.3
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 5.2e-37 158.3 154 56.5
Gohir.A03G018400 Gossypium hirsutum HOM05D008129 ORTHO05D010232 1.7e-35 153.3 154 55.8
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 3.2e-31 139.0 159 49.1
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 1.6e-30 136.7 158 46.8
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 1.0e-29 134.0 158 45.6
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 1.4e-29 133.7 147 51.0
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 8.8e-29 131.0 148 49.3
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 7.5e-28 127.9 145 48.3
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 1.3e-27 127.1 160 47.5
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 1.7e-27 126.7 148 48.0
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 3.7e-27 125.6 142 50.7
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 2.4e-26 122.9 140 49.3
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 4.1e-26 122.1 162 45.7
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 5.4e-26 121.7 155 46.5
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 7.0e-26 121.3 157 43.9
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 9.1e-26 120.9 137 46.0
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 2.7e-25 119.4 162 43.8
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 2.7e-25 119.4 163 43.6
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 3.5e-25 119.0 157 45.2
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 5.9e-25 118.2 160 45.0
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 5.9e-25 118.2 173 42.2
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 7.7e-25 117.9 160 45.0
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.0e-24 117.5 160 45.0
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 1.0e-24 117.5 150 44.7
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 1.5e-23 113.6 160 44.4
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.5e-23 113.6 160 44.4
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 2.5e-23 112.8 146 45.2
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 4.2e-23 112.1 141 44.7
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 1.6e-22 110.2 147 46.3
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 1.6e-22 110.2 153 43.8
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 3.6e-22 109.0 141 42.6
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 1.0e-21 107.5 158 42.4
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.0e-21 107.5 165 39.4
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 4.0e-21 105.5 142 43.0
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 8.8e-21 104.4 180 37.2
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 1.5e-20 103.6 145 42.8
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 4.4e-20 102.1 142 39.4
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 2.8e-19 99.4 138 43.5
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 4.9e-19 98.6 137 43.8
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 3.1e-18 95.9 173 39.9
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 1.2e-17 94.0 174 36.8
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 3.5e-17 92.4 131 38.2
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 1.0e-16 90.9 133 37.6
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 2.3e-16 89.7 131 37.4
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.3e-15 85.9 148 37.8
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 1.2e-14 84.0 135 36.3
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 1.6e-14 83.6 134 39.6
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 2.1e-14 83.2 131 40.5
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 2.8e-14 82.8 117 41.9
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 3.6e-14 82.4 132 36.4
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 4.7e-14 82.0 141 36.9
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 6.1e-14 81.6 182 36.8
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 8.0e-14 81.3 127 40.2
ClCG01G003050 Citrullus lanatus HOM05D008129 ORTHO05D010232 8.9e-13 77.8 139 38.8
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 1.2e-12 77.4 82 43.9
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 1.5e-12 77.0 145 33.1
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 2.0e-12 76.6 159 35.2
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 2.0e-12 76.6 133 33.1
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 7.0e-10 68.2 75 46.7
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 1.0e-08 64.3 51 56.9
Lj2g0000650 Lotus japonicus HOM05D008129 ORTHO05D010232 1.9e-07 60.1 80 42.5
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 1.9e-07 60.1 71 42.3


User provided reference genes

Program Settings