Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 9.0e-105 383.6 200 100.0
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.3e-84 316.6 190 86.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.0e-80 302.8 200 82.0
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.5e-78 295.8 200 80.0
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 3.2e-78 295.4 200 80.0
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 5.0e-71 271.6 191 75.4
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.9e-70 269.6 189 76.2
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.1e-69 266.2 192 72.9
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 2.7e-69 265.8 191 73.3
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 3.6e-69 265.4 190 72.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 6.1e-69 264.6 195 69.2
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 6.1e-69 264.6 190 75.3
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.0e-68 263.8 169 78.7
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.8e-68 263.1 190 70.5
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.8e-68 263.1 190 72.1
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 3.0e-68 262.3 190 72.1
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 8.8e-68 260.8 194 72.7
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.5e-67 260.0 190 71.1
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.4e-67 258.5 190 70.5
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.7e-66 256.5 190 70.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 2.2e-66 256.1 192 66.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 3.7e-66 255.4 191 73.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.7e-66 255.4 191 70.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.4e-65 253.4 190 71.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 3.1e-65 252.3 189 71.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.2e-64 250.4 193 68.9
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.0e-64 249.6 190 72.1
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.6e-64 249.2 190 70.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.6e-64 249.2 187 70.1
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.6e-64 249.2 191 69.1
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 3.5e-64 248.8 187 70.6
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 4.5e-64 248.4 190 66.3
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 5.9e-64 248.1 162 75.3
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 5.9e-64 248.1 192 66.7
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 5.9e-64 248.1 188 67.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.0e-63 247.3 190 66.8
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.3e-63 246.9 185 68.1
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.2e-63 246.1 190 71.1
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.5e-63 244.6 190 68.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.5e-63 244.6 190 68.4
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 8.5e-63 244.2 191 67.5
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.1e-62 243.8 194 69.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.5e-62 243.4 191 71.2
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.5e-62 243.4 191 66.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.9e-62 243.0 188 66.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.5e-62 242.7 190 70.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 3.2e-62 242.3 187 68.4
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.2e-62 242.3 199 67.3
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 4.2e-62 241.9 191 70.7
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 4.2e-62 241.9 182 66.5
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 5.5e-62 241.5 191 70.7
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 5.5e-62 241.5 191 70.7
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 9.4e-62 240.7 191 70.2
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 9.4e-62 240.7 190 68.9
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.1e-61 239.6 194 66.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.1e-61 239.6 190 68.9
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.7e-61 239.2 190 65.8
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.4e-60 236.9 192 62.5
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.4e-60 236.9 196 66.8
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.8e-60 236.5 194 66.0
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 6.7e-60 234.6 201 62.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 6.7e-60 234.6 155 74.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 2.0e-59 233.0 200 66.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 2.0e-59 233.0 190 63.7
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 2.6e-59 232.6 162 69.1
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 5.7e-59 231.5 194 66.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 9.7e-59 230.7 192 62.5
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.7e-58 229.9 172 70.3
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.8e-58 229.2 191 61.3
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.7e-58 228.8 164 68.3
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.7e-58 228.8 191 65.4
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.7e-58 228.8 196 65.3
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 3.7e-58 228.8 185 63.2
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.7e-58 228.8 185 63.2
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.7e-58 228.8 194 62.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 6.3e-58 228.0 162 67.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 8.2e-58 227.6 170 65.9
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.1e-57 225.7 191 60.7
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.1e-57 225.7 193 61.1
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 9.1e-57 224.2 194 61.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 9.1e-57 224.2 155 72.9
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 2.0e-56 223.0 192 60.9
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 2.7e-56 222.6 191 64.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 5.9e-56 221.5 175 64.0
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 5.9e-56 221.5 158 66.5
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 3.8e-55 218.8 153 73.9
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 6.5e-55 218.0 196 59.7
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 6.5e-55 218.0 191 58.6
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 9.4e-54 214.2 171 64.9
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.6e-53 213.4 174 61.5
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.4e-52 210.3 192 57.8
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.4e-52 210.3 174 59.2
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.4e-51 205.3 190 58.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 2.4e-49 199.5 191 51.8
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.3e-47 193.0 183 57.9
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.6e-45 186.8 106 92.5
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 2.2e-42 176.4 197 56.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 4.1e-41 172.2 162 55.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 3.3e-38 162.5 155 53.5
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 3.3e-38 162.5 163 49.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 4.9e-34 148.7 120 69.2
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 7.8e-32 141.4 176 43.2
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.1e-30 137.5 119 65.5
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.6e-24 115.5 160 44.4
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 8.6e-23 111.3 118 55.9
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.0e-15 87.8 180 35.0
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 8.9e-12 74.7 48 79.2
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 5.8e-11 72.0 161 34.2
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 9.9e-11 71.2 52 67.3
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 7.1e-09 65.1 43 74.4


User provided reference genes

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