Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 2.2e-126 455.7 231 100.0
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 9.4e-114 413.7 230 91.7
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.2e-113 413.3 230 91.7
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.4e-112 409.8 230 91.3
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 7.7e-108 394.0 228 88.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 5.9e-100 367.9 233 79.4
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 4.2e-98 361.7 225 82.2
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 7.2e-98 360.9 233 76.8
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 9.4e-98 360.5 234 77.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.6e-97 359.8 229 77.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.1e-97 359.4 227 79.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 6.1e-97 357.8 224 79.9
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.2e-96 354.8 225 79.6
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.0e-95 352.8 224 78.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.0e-95 352.8 232 78.0
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.0e-95 352.8 229 75.5
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.6e-95 352.4 223 77.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 2.6e-95 352.4 230 78.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 5.7e-95 351.3 225 77.8
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 9.7e-95 350.5 230 77.0
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.3e-94 350.1 221 82.4
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.7e-94 349.7 235 76.6
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 2.8e-94 349.0 225 78.2
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 3.7e-94 348.6 224 77.7
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 3.7e-94 348.6 227 76.7
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 6.3e-94 347.8 231 76.6
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.8e-93 346.3 225 76.4
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.8e-93 346.3 226 75.7
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 2.4e-93 345.9 224 76.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.4e-93 345.9 225 76.4
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 7.0e-93 344.4 227 76.2
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 9.1e-93 344.0 232 75.4
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 2.0e-92 342.8 227 76.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.0e-92 342.8 231 76.6
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.0e-92 342.8 228 73.2
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.7e-92 342.4 228 75.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 4.5e-92 341.7 228 74.1
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.0e-91 340.5 228 74.6
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.0e-91 340.5 243 70.8
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.0e-91 340.5 226 75.7
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.3e-91 340.1 241 72.6
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.3e-91 340.1 230 74.3
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.2e-91 339.3 223 74.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 2.2e-91 339.3 228 75.0
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.5e-91 337.4 238 71.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.1e-90 337.0 233 73.8
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.1e-90 337.0 239 72.4
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.5e-90 336.7 229 76.0
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.5e-90 336.7 226 75.2
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.2e-90 335.5 236 72.5
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 4.2e-90 335.1 223 74.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 5.5e-90 334.7 228 75.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 2.1e-89 332.8 223 75.3
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 3.6e-89 332.0 223 75.3
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 6.1e-89 331.3 223 74.0
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 6.1e-89 331.3 223 74.0
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 6.1e-89 331.3 226 74.8
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.0e-89 330.9 225 75.1
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.4e-88 330.1 273 65.6
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 3.0e-88 328.9 228 74.1
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 6.8e-88 327.8 228 70.6
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 8.8e-88 327.4 224 71.9
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.6e-87 325.9 263 66.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.7e-87 324.7 223 73.5
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 9.8e-87 323.9 231 71.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 9.8e-87 323.9 228 69.3
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.2e-86 322.8 231 71.4
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 2.8e-86 322.4 218 74.3
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.8e-86 322.4 234 70.5
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.3e-86 320.9 234 70.9
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.1e-85 320.5 175 85.1
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.8e-85 319.7 230 70.0
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.4e-85 319.3 298 60.1
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.1e-85 318.5 221 74.2
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 4.1e-85 318.5 222 71.6
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.4e-85 318.2 253 66.4
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.5e-84 315.1 219 73.5
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.7e-83 313.2 242 68.2
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 4.2e-82 308.5 227 69.6
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.7e-81 305.1 183 80.3
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.0e-80 303.9 232 67.2
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.0e-80 303.9 295 58.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 4.0e-80 302.0 226 69.5
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 1.3e-78 297.0 229 67.2
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 9.2e-77 290.8 183 76.0
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 1.6e-76 290.0 228 68.4
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.0e-75 287.3 202 74.3
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 5.2e-72 275.0 228 61.0
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 2.6e-71 272.7 230 63.5
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 7.5e-71 271.2 183 77.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 6.4e-70 268.1 249 58.2
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 8.3e-70 267.7 243 61.3
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 8.3e-70 267.7 225 60.4
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.1e-69 267.3 193 64.8
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 3.2e-69 265.8 160 79.4
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 7.0e-69 264.6 229 60.7
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 6.6e-67 258.1 181 69.1
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.1e-65 253.1 378 43.9
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 7.5e-63 244.6 186 67.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 7.0e-61 238.0 228 58.8
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.2e-55 220.7 182 58.8
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 5.1e-51 205.3 154 72.1
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-50 204.1 180 64.4
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 9.5e-50 201.1 148 71.6
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.5e-44 182.6 227 44.1
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 66.9
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 66.9
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 2.6e-39 166.4 164 56.1
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 7.8e-36 154.8 138 64.5
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 5.6e-34 148.7 203 40.4
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 1.3e-33 147.5 218 38.1
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.3e-30 137.5 149 53.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 4.9e-30 135.6 149 53.7
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.8e-25 119.8 108 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 9.0e-24 114.8 146 45.9
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.4e-21 107.5 96 63.5
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 3.2e-21 106.3 79 65.8
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 5.5e-21 105.5 54 88.9
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.3e-19 100.9 100 58.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 6.2e-17 92.0 97 59.8
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.2e-13 79.3 84 50.0
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 6.0e-12 75.5 48 72.9


User provided reference genes

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