Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G240500 Theobroma cacao HOM05D008061 ORTHO05D010779 1.0e-100 370.2 199 100.0
Duzib068G0936 Durio zibethinus HOM05D008061 ORTHO05D010779 4.1e-57 225.3 186 69.9
Gohir.D08G183000 Gossypium hirsutum HOM05D008061 ORTHO05D010779 2.9e-47 192.6 205 60.0
Gorai.004G192100 Gossypium raimondii HOM05D008061 ORTHO05D010779 8.5e-47 191.0 205 59.5
Gohir.A08G163200 Gossypium hirsutum HOM05D008061 ORTHO05D010779 3.0e-44 182.6 206 58.7
Actinidia02194 Actinidia chinensis HOM05D008061 ORTHO05D010779 2.2e-31 139.8 188 51.1
Manes.01G088600 Manihot esculenta HOM05D008061 ORTHO05D010779 4.7e-29 132.1 179 50.3
GSVIVG01003690001 Vitis vinifera HOM05D008061 ORTHO05D010779 1.4e-28 130.6 186 47.3
Ciclev10023888m.g Citrus clementina HOM05D008061 ORTHO05D010779 2.6e-27 126.3 204 43.6
Sabra01G0121100 Salix brachista HOM05D008061 ORTHO05D010779 9.8e-27 124.4 184 51.6
TAR374G1692 Trochodendron aralioides HOM05D008061 ORTHO05D010779 1.4e-25 120.6 157 51.6
Prupe.5G055600 Prunus persica HOM05D008061 ORTHO05D010779 2.4e-25 119.8 188 48.4
Hma1.2p1_0840F.1_g226620 Hydrangea macrophylla HOM05D008061 ORTHO05D010779 5.9e-24 115.2 177 45.8
Potri.001G151150 Populus trichocarpa HOM05D008061 ORTHO05D010779 1.3e-23 114.0 175 49.7
FAN04G2594 Fragaria x ananassa HOM05D008061 ORTHO05D010779 1.5e-22 110.5 182 45.6
Glyma.17G148100 Glycine max HOM05D008061 ORTHO05D010779 2.1e-21 106.7 156 43.6
Dinv25134 Davidia involucrata HOM05D008061 ORTHO05D010779 5.7e-19 98.6 89 59.6
Aqoxy3G02649 Aquilegia oxysepala HOM05D008061 ORTHO05D010779 2.2e-18 96.7 178 46.6
Glyma.05G066300 Glycine max HOM05D008061 ORTHO05D010779 2.9e-18 96.3 130 48.5
arahy.Tifrunner.gnm1.ann1.W4BIYL Arachis hypogaea HOM05D008061 ORTHO05D010779 6.4e-18 95.1 178 42.7
arahy.Tifrunner.gnm1.ann1.DFJS0M Arachis hypogaea HOM05D008061 ORTHO05D010779 2.4e-17 93.2 145 46.9
FvH4_5g20360 Fragaria vesca HOM05D008061 ORTHO05D010779 3.2e-17 92.8 181 43.6
COL.COLO4_07200 Corchorus olitorius HOM05D008061 ORTHO05D010779 7.0e-17 91.7 100 56.0
FAN08G2093 Fragaria x ananassa HOM05D008061 ORTHO05D010779 2.7e-16 89.7 183 43.2
CANSAT21G0076 Cannabis sativa HOM05D008061 ORTHO05D010779 3.5e-16 89.4 181 41.4
FAN18G1745 Fragaria x ananassa HOM05D008061 ORTHO05D012872 4.6e-16 89.0 172 44.2
Nitab4.5_0000500g0230 Nicotiana tabacum HOM05D008061 ORTHO05D010779 4.6e-16 89.0 175 36.6
Sopen08g026380 Solanum pennellii HOM05D008061 ORTHO05D010779 5.9e-16 88.6 181 39.8
Solyc08g077870.4 Solanum lycopersicum HOM05D008061 ORTHO05D010779 1.0e-15 87.8 181 39.8
Nitab4.5_0009451g0020 Nicotiana tabacum HOM05D008061 ORTHO05D010779 1.3e-15 87.4 177 35.6
Cc08_g11350 Coffea canephora HOM05D008061 ORTHO05D010779 4.3e-14 82.4 130 39.2
Lj4g0021703 Lotus japonicus HOM05D008061 ORTHO05D010779 4.3e-14 82.4 187 36.9
CsaV3_3G002280 Cucumis sativus L. HOM05D002840 ORTHO05D010779 1.4e-12 77.4 164 39.0
VMungo0251G0783 Vigna mungo HOM05D008061 ORTHO05D010779 2.6e-11 73.2 150 37.3
Medtr4g099310 Medicago truncatula HOM05D008061 ORTHO05D010779 4.4e-11 72.4 165 38.8
Phvul.003G225300 Phaseolus vulgaris HOM05D008061 ORTHO05D010779 9.8e-11 71.2 150 37.3
FAN18G0150 Fragaria x ananassa HOM05D008061 ORTHO05D010779 2.9e-10 69.7 102 49.0
Peaxi162Scf00190g00717 Petunia axillaris HOM05D008061 ORTHO05D010779 8.3e-10 68.2 204 32.4
Nn6g33758 Nelumbo nucifera HOM05D008061 ORTHO05D010779 1.6e-08 63.9 130 41.5
RcHm_v2.0_Chr7g0205621 Rosa chinensis HOM05D008061 ORTHO05D010779 3.5e-08 62.8 106 47.2
ClCG10G002240 Citrullus lanatus HOM05D002840 ORTHO05D003088 6.0e-08 62.0 175 33.1
TPR.G17144 Trifolium pratense HOM05D008061 ORTHO05D010779 1.3e-07 60.8 155 38.7
Haze_08370 Corylus avellana HOM05D008061 ORTHO05D010779 2.3e-07 60.1 92 52.2
HanXRQChr03g0089731 Helianthus annuus HOM05D008061 ORTHO05D010779 2.5e-06 56.6 212 34.4
PSO782G5540 Papaver somniferum HOM05D055867 ORTHO05D050180 4.3e-06 55.8 191 29.3
PGR031G3579 Punica granatum HOM05D008061 ORTHO05D010779 7.3e-06 55.1 87 39.1


User provided reference genes

Program Settings