Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.5e-124 449.5 224 100.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.6e-110 402.9 224 89.3
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 8.0e-110 400.6 224 88.4
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.8e-109 399.4 224 89.3
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.0e-109 398.3 224 88.8
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 7.0e-106 387.5 235 84.3
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.2e-105 386.7 225 85.3
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 5.9e-105 384.4 225 84.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.5e-103 379.0 225 84.0
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 4.7e-102 374.8 225 83.6
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 8.6e-88 327.4 224 72.3
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 2.5e-87 325.9 225 71.6
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.5e-87 325.9 224 71.4
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 2.5e-87 325.9 224 68.8
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.8e-86 322.4 219 72.6
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 4.7e-86 321.6 221 71.0
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 6.1e-86 321.2 213 71.8
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.0e-85 320.5 219 72.1
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.4e-85 320.1 261 63.6
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 1.2e-84 317.0 221 70.6
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.5e-84 316.6 219 70.8
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 2.0e-84 316.2 224 70.1
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 2.0e-84 316.2 224 69.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 2.0e-84 316.2 220 70.5
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 3.4e-84 315.5 226 70.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 4.4e-84 315.1 217 71.9
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.4e-84 315.1 212 71.7
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 7.5e-84 314.3 226 68.1
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 7.5e-84 314.3 233 68.7
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 1.7e-83 313.2 208 72.6
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.2e-83 312.8 226 67.7
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 2.2e-83 312.8 212 73.6
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 8.3e-83 310.8 215 70.2
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 4.1e-82 308.5 226 66.8
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 5.4e-82 308.1 240 65.8
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 5.4e-82 308.1 240 66.7
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 7.0e-82 307.8 223 69.1
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.5e-81 305.4 210 71.4
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 5.9e-81 304.7 216 70.8
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.7e-80 303.1 233 66.1
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 3.0e-80 302.4 221 67.9
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.9e-80 302.0 229 66.4
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 5.0e-80 301.6 234 65.0
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 8.6e-80 300.8 224 64.7
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 8.6e-80 300.8 310 53.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 8.6e-80 300.8 218 67.0
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 8.6e-80 300.8 232 66.4
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.5e-79 300.1 223 67.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 3.3e-79 298.9 225 65.8
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.3e-79 298.5 231 64.9
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.2e-78 297.0 209 67.5
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 1.6e-78 296.6 211 69.2
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 2.8e-78 295.8 212 68.4
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 2.8e-78 295.8 233 61.4
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 2.8e-78 295.8 209 66.0
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.7e-78 295.0 218 67.4
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.4e-77 293.5 213 65.3
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 1.4e-77 293.5 217 66.4
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-77 293.1 234 64.5
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 2.3e-77 292.7 215 65.6
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 5.2e-77 291.6 209 67.5
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 6.8e-77 291.2 227 62.1
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.5e-76 290.0 217 65.0
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 2.0e-76 289.7 212 67.0
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.6e-76 289.3 231 64.1
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 5.8e-76 288.1 210 64.8
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 7.5e-76 287.7 218 64.2
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.3e-75 287.0 227 62.1
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.3e-75 287.0 209 67.5
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 3.7e-75 285.4 223 64.1
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 6.4e-75 284.6 209 66.5
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 8.3e-75 284.3 209 66.5
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 8.3e-75 284.3 209 66.5
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 8.3e-75 284.3 209 66.5
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.4e-74 283.5 216 63.4
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 3.2e-74 282.3 221 64.7
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 3.2e-74 282.3 229 61.1
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 4.1e-74 282.0 224 61.6
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 7.0e-74 281.2 225 62.7
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 9.2e-74 280.8 224 60.7
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.6e-73 280.0 224 61.2
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 3.5e-73 278.9 226 60.6
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 6.0e-73 278.1 226 60.6
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.0e-72 275.8 228 60.1
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.0e-72 275.0 220 60.9
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 7.3e-71 271.2 282 53.5
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 2.1e-70 269.6 226 58.8
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.8e-70 269.2 215 62.3
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 3.6e-70 268.9 232 61.2
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.7e-70 268.5 215 62.3
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 6.2e-70 268.1 226 60.2
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 8.1e-70 267.7 226 60.2
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 8.1e-70 267.7 226 58.4
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 4.0e-69 265.4 207 64.3
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 9.8e-68 260.8 226 56.6
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 9.8e-68 260.8 226 56.6
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 1.9e-66 256.5 221 59.3
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.8e-65 251.1 144 84.7
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 6.6e-64 248.1 220 56.8
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.9e-63 246.5 190 62.1
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 2.8e-62 242.7 154 74.0
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 6.8e-61 238.0 140 76.4
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 9.9e-60 234.2 211 51.2
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.9e-59 231.9 214 57.9
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.6e-57 226.9 143 73.4
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 4.0e-53 212.2 142 72.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 4.0e-53 212.2 214 48.6
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.2e-53 211.8 139 72.7
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.4e-45 187.2 211 49.8
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.9e-42 176.8 115 72.2
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.5e-41 172.6 117 65.8
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 3.1e-29 132.9 192 40.6
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 3.9e-16 89.4 180 33.9
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.7e-15 85.5 55 76.4
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.6e-14 84.0 118 40.7
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 4.6e-09 65.9 207 29.0


User provided reference genes

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