Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G216000 Theobroma cacao HOM05D007599 ORTHO05D009548 2.7e-16 88.6 89 100.0
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 8.9e-12 73.6 86 76.7
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 8.9e-12 73.6 86 76.7
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 4.4e-11 71.2 86 55.8
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 5.7e-11 70.9 89 71.9
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 4.9e-10 67.8 90 51.1
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 7.0e-09 63.9 89 59.6
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 7.0e-09 63.9 89 43.8
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 9.2e-09 63.5 89 51.7
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.6e-08 62.8 89 68.5
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 2.7e-08 62.0 89 69.7
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 5.9e-08 60.8 90 45.6
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.0e-07 60.1 89 75.3
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 1.3e-07 59.7 89 76.4
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 1.7e-07 59.3 89 68.5
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 6.6e-07 57.4 85 70.6
Eucgr.L00349 Eucalyptus grandis HOM05D007599 ORTHO05D009548 6.6e-07 57.4 89 82.0
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 1.9e-06 55.8 85 41.2
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 3.3e-06 55.1 89 44.9
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 3.3e-06 55.1 89 44.9
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 4.3e-06 54.7 89 40.4


User provided reference genes

Program Settings