Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 0.0e+00 2259.2 1175 100.0
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 0.0e+00 1912.9 1180 84.9
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 0.0e+00 1799.6 1192 79.3
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 0.0e+00 1799.6 1192 79.7
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 0.0e+00 1729.1 1192 77.1
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 0.0e+00 1413.7 1191 63.5
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 0.0e+00 1401.0 1193 62.9
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 0.0e+00 1373.2 1185 63.5
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 0.0e+00 1354.3 1198 61.4
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 0.0e+00 1354.3 1184 62.1
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 0.0e+00 1352.8 1195 61.8
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 0.0e+00 1352.4 1207 61.1
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 0.0e+00 1349.7 1206 61.4
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 0.0e+00 1344.3 1192 60.8
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 0.0e+00 1342.8 1165 64.0
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1331.6 1183 61.1
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 0.0e+00 1330.9 1185 61.4
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 0.0e+00 1330.5 1137 64.3
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1310.0 1185 60.6
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1286.2 1185 59.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 0.0e+00 1285.0 1139 61.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 0.0e+00 1266.5 1208 58.2
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 0.0e+00 1233.0 1196 56.7
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 0.0e+00 1228.8 1200 56.8
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 0.0e+00 1218.0 1188 58.0
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 0.0e+00 1215.7 1200 55.6
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 0.0e+00 1201.8 1149 58.7
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 0.0e+00 1187.2 1198 55.4
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 0.0e+00 1181.8 1203 54.2
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 0.0e+00 1175.2 1198 54.7
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 0.0e+00 1174.8 1212 54.3
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 0.0e+00 1161.7 1186 53.6
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 0.0e+00 1158.3 1189 53.0
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 0.0e+00 1157.5 1188 53.3
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 0.0e+00 1156.4 1203 53.6
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 0.0e+00 1149.4 1333 50.6
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 0.0e+00 1149.4 1158 55.7
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 0.0e+00 1142.9 1228 54.0
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 0.0e+00 1135.6 1188 52.8
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 0.0e+00 1120.5 1195 53.1
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 0.0e+00 1115.1 1334 49.8
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 0.0e+00 1108.6 1195 52.1
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 0.0e+00 1095.5 1182 51.9
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 0.0e+00 1094.7 1192 52.4
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 0.0e+00 1093.6 1182 51.8
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 0.0e+00 1085.9 1176 51.8
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 0.0e+00 1082.0 1186 52.1
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 0.0e+00 1081.6 1182 52.0
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 0.0e+00 1081.6 1187 51.5
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 0.0e+00 1081.6 1187 51.5
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 0.0e+00 1078.2 1205 51.5
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 1.6e-310 1069.7 1182 51.7
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 8.0e-310 1067.4 1186 51.4
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.0e-309 1067.0 1191 50.8
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 2.3e-309 1065.8 1091 53.8
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 9.1e-306 1053.9 1176 51.3
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 4.7e-302 1041.6 1078 53.6
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 6.1e-302 1041.2 1078 53.7
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.8e-301 1039.6 1078 53.3
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 3.3e-300 1035.4 1325 46.8
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 9.7e-300 1033.9 1031 54.4
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.4e-298 1030.0 1139 51.2
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 4.1e-298 1028.5 858 64.2
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 9.4e-295 1017.3 1083 52.5
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 2.7e-294 1015.8 1216 48.6
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 5.5e-287 991.5 1081 51.8
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.4e-285 986.9 1175 48.9
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 2.4e-282 976.1 1218 46.4
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 3.3e-279 965.7 1148 49.4
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 3.6e-278 962.2 1083 50.8
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 2.2e-275 953.0 843 62.0
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.7e-272 943.3 1161 48.6
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 3.6e-270 935.6 1156 48.4
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 3.6e-270 935.6 1211 46.8
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 1.2e-254 884.0 1156 48.1
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 2.6e-244 849.7 1201 42.5
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.5e-241 839.3 983 51.5
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 4.6e-241 839.0 897 54.6
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 4.3e-231 805.8 1422 38.4
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 6.7e-216 755.4 847 49.9
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 1.7e-211 740.7 870 49.8
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 2.9e-203 713.4 656 57.5
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 4.5e-196 689.5 937 45.1
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 5.2e-184 649.4 498 67.3
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 8.8e-184 648.7 957 42.1
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 4.8e-174 616.3 1142 36.5
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.6e-172 611.3 557 57.1
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 1.5e-170 604.7 975 39.4
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 6.8e-168 595.9 595 55.3
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 9.2e-165 585.5 576 56.6
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 1.3e-163 581.6 611 55.6
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 1.4e-160 571.6 453 71.3
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.2e-149 533.9 759 43.1
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 1.2e-145 521.9 670 45.2
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.0e-136 490.3 476 55.0
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 2.1e-132 478.0 588 46.1
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 8.6e-131 472.6 583 47.9
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 3.2e-125 454.1 536 49.4
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 1.4e-109 402.1 499 48.3
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 6.3e-97 360.1 750 33.9
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 2.0e-95 355.1 416 49.3
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 3.0e-91 341.3 387 50.9
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 1.4e-75 289.3 258 62.8
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 7.0e-72 276.9 168 83.3
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 6.3e-65 253.8 899 26.6
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 1.6e-60 239.2 165 70.9
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.4e-59 236.1 255 49.8
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 7.7e-55 220.3 371 38.0
CiPaw.11G106300 Carya illinoinensis HOM05D000087 ORTHO05D005735 2.9e-54 218.4 259 47.5
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.1e-52 212.2 175 68.0
MD14G1142800 Malus domestica HOM05D000087 ORTHO05D005735 1.7e-49 202.6 243 46.9
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.2e-47 196.4 275 46.2
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.9e-46 191.8 233 50.6
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-44 186.4 571 31.7
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 6.1e-44 184.1 262 43.9
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.2e-40 171.8 130 63.1
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 2.5e-37 162.2 123 64.2
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 1.1e-35 156.8 170 51.8
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 6.8e-35 154.1 1142 21.5
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 9.8e-34 150.2 246 35.8
Duzib084G0615 Durio zibethinus HOM05D000087 ORTHO05D005735 1.1e-32 146.7 93 84.9
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 2.6e-26 125.6 130 53.1
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 4.4e-26 124.8 108 63.9
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 6.0e-23 114.4 99 57.6
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-22 112.8 86 64.0
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.7e-22 112.8 86 61.6
VMungo1127G1440 Vigna mungo HOM05D000087 ORTHO05D005735 7.3e-21 107.5 159 41.5
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 8.9e-19 100.5 96 53.1
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 1.5e-18 99.8 103 50.5
RcHm_v2.0_Chr7g0188121 Rosa chinensis HOM05D000087 ORTHO05D005735 2.0e-18 99.4 71 74.6
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.4e-18 98.2 65 72.3
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 7.6e-18 97.4 122 46.7
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 7.6e-18 97.4 78 64.1
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.2e-17 95.9 95 49.5
VMungo1080G1218 Vigna mungo HOM05D000087 ORTHO05D005735 1.1e-16 93.6 110 49.1
MBI04_g07085_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.1e-15 89.4 95 52.6
VMungo0145G0001 Vigna mungo HOM05D000087 ORTHO05D005735 2.1e-15 89.4 97 52.6
MBI04_g39794_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.7e-15 89.0 95 52.6
CARHR046160 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.2e-12 80.1 61 68.9
RcHm_v2.0_Chr7g0188101 Rosa chinensis HOM05D000087 ORTHO05D005735 6.2e-12 77.8 89 46.1
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.8e-11 76.3 75 53.3
SalBow1G5284 Salvia bowleyana HOM05D000087 ORTHO05D005735 2.4e-11 75.9 93 50.5
CSS0049190 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.6e-10 72.4 66 56.1
CARHR293850 Cardamine hirsuta HOM05D000087 ORTHO05D005735 5.8e-10 71.2 75 56.0
MBI04_g04802_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 7.6e-10 70.9 65 60.0
Ah.10g034360 Amaranthus hybridus HOM05D000087 ORTHO05D005735 1.7e-09 69.7 84 45.2
CARHR293860 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.9e-09 68.2 75 42.7
CARHR291380 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.4e-08 66.6 63 61.9
CSS0034676 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.9e-06 58.5 114 38.6


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