Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 4.5e-141 504.6 255 100.0
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 4.3e-59 232.3 259 54.1
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 9.5e-59 231.1 259 52.5
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 2.1e-58 229.9 259 53.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 3.9e-52 209.1 272 48.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.5e-51 206.5 260 49.6
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.2e-50 204.1 258 51.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 2.8e-50 203.0 273 47.6
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 8.1e-50 201.4 264 48.5
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.4e-49 200.7 252 50.8
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.8e-49 198.4 252 50.4
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 8.9e-49 198.0 252 50.8
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.4e-46 188.7 262 44.7
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.5e-45 186.0 258 47.7
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.7e-44 183.7 259 48.3
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.5e-43 180.6 259 47.9
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.5e-43 179.9 259 45.6
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.7e-42 175.6 250 44.4
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 2.4e-41 173.3 270 45.2
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 5.2e-41 172.2 263 46.4
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 2.6e-40 169.9 268 44.8
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 1.6e-37 160.6 263 42.6
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.3e-36 157.5 259 44.0
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.1e-35 154.5 257 43.2
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.1e-35 154.5 234 45.3
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 5.3e-33 145.6 264 40.9
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 5.8e-32 142.1 276 39.9
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.7e-31 140.6 253 40.7
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.9e-31 139.8 259 38.2
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.1e-30 137.9 265 37.4
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.4e-30 137.5 242 43.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.2e-29 134.4 265 37.7
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.1e-29 133.7 259 37.8
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.9e-29 131.7 263 38.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.1e-27 127.9 269 37.5
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 7.3e-27 125.2 257 38.5
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.6e-26 124.0 258 37.6
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 8.1e-26 121.7 232 40.9
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 8.1e-26 121.7 264 37.1
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.1e-25 121.3 261 37.5
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.1e-25 121.3 266 36.1
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.4e-25 120.9 261 34.9
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 1.4e-25 120.9 256 36.7
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.8e-25 120.6 266 36.1
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 3.1e-25 119.8 269 36.1
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.0e-24 117.1 253 37.5
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.5e-24 115.9 267 35.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 5.8e-24 115.5 256 35.9
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 9.9e-24 114.8 261 36.4
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.3e-23 114.4 254 37.8
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.3e-23 114.4 254 37.8
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 2.2e-23 113.6 258 36.8
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.2e-23 113.6 255 35.7
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 8.4e-23 111.7 264 35.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 2.4e-22 110.2 195 39.0
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.2e-22 109.4 201 39.8
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 1.2e-21 107.8 222 41.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.6e-21 107.5 250 34.4
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 2.1e-21 107.1 270 35.2
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 4.6e-21 105.9 261 34.5
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 1.0e-20 104.8 267 35.6
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.3e-20 104.4 253 35.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 1.3e-20 104.4 257 34.2
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 2.3e-20 103.6 266 36.8
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 3.0e-20 103.2 243 37.0
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 3.0e-20 103.2 253 35.2
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 3.9e-20 102.8 264 33.7
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 5.1e-20 102.4 253 35.2
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.7e-20 102.1 251 34.3
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 8.7e-20 101.7 254 34.6
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.9e-19 100.5 253 34.4
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.5e-19 100.1 280 35.4
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.3e-18 97.8 282 35.1
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.6e-18 97.4 258 36.8
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.6e-18 97.4 227 37.0
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 2.1e-18 97.1 217 36.4
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 2.8e-18 96.7 264 34.1
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 4.8e-18 95.9 223 37.2
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.2e-18 95.5 254 33.9
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 6.2e-18 95.5 276 33.7
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 1.1e-17 94.7 258 36.4
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 1.1e-17 94.7 226 35.8
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.4e-17 94.4 266 31.6
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.8e-17 94.0 254 33.9
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 5.3e-17 92.4 238 35.3
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 9.0e-17 91.7 259 32.4
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.2e-16 91.3 264 33.0
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.6e-16 90.1 165 40.0
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 4.5e-16 89.4 158 44.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 5.8e-16 89.0 230 33.9
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 7.6e-16 88.6 269 31.6
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.7e-15 87.4 251 32.3
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.8e-15 86.3 194 39.2
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.1e-14 84.7 165 39.4
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.1e-14 84.7 235 31.5
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.4e-14 84.3 222 34.2
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.5e-14 83.6 242 31.8
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 3.2e-14 83.2 257 33.1
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 3.5e-13 79.7 164 37.2
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 3.5e-13 79.7 252 31.7
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 2.5e-11 73.6 228 32.9
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.5e-11 73.6 228 32.9
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 3.3e-11 73.2 233 30.5
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 4.3e-11 72.8 213 33.3
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 1.3e-10 71.2 218 33.0
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 1.6e-10 70.9 252 30.6
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 1.8e-09 67.4 211 31.8
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 3.1e-09 66.6 234 30.8
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 4.1e-09 66.2 205 30.2
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.6e-08 63.5 114 37.7
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.5e-08 62.8 124 35.5
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 6.5e-07 58.9 234 29.9


User provided reference genes

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