Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 1.6e-42 175.6 86 100.0
COL.COLO4_14294 Corchorus olitorius HOM05D015019 ORTHO05D013840 1.5e-24 115.9 73 82.2
Gohir.D09G175500 Gossypium hirsutum HOM05D015019 ORTHO05D013840 7.7e-21 103.6 88 65.9
Gorai.006G197600 Gossypium raimondii HOM05D015019 ORTHO05D013840 7.7e-21 103.6 88 65.9
Gohir.A09G180600 Gossypium hirsutum HOM05D015019 ORTHO05D013840 5.0e-20 100.9 88 65.9
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 1.0e-17 93.2 81 58.0
Potri.012G138100 Populus trichocarpa HOM05D015019 ORTHO05D013840 9.1e-14 80.1 89 49.4
Potri.015G139900 Populus trichocarpa HOM05D015019 ORTHO05D013840 5.0e-12 74.3 85 49.4
Thecc.03G175000 Theobroma cacao HOM05D012645 ORTHO05D011500 6.1e-10 67.4 88 42.0
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 6.1e-10 67.4 86 46.5
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 5.2e-09 64.3 82 41.5
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 1.5e-08 62.8 79 43.0
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 1.5e-08 62.8 79 43.0
Phvul.004G117600 Phaseolus vulgaris HOM05D018452 ORTHO05D013840 1.5e-08 62.8 85 45.9
Manes.06G146200 Manihot esculenta HOM05D015019 ORTHO05D013840 2.0e-08 62.4 88 42.0
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 5.7e-08 60.8 90 43.3
Glyma.09G140400 Glycine max HOM05D018452 ORTHO05D013840 1.3e-07 59.7 78 42.3
Glyma.16G194300 Glycine max HOM05D018452 ORTHO05D013840 6.3e-07 57.4 78 41.0
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 6.3e-07 57.4 79 46.8
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 1.1e-06 56.6 87 37.9
DCAR_008411 Daucus carota HOM05D008852 ORTHO05D010731 1.4e-06 56.2 76 38.2
Manes.01G064900 Manihot esculenta HOM05D008852 ORTHO05D010731 2.4e-06 55.5 81 38.3
CiPaw.04G065000 Carya illinoinensis HOM05D018452 ORTHO05D013840 4.1e-06 54.7 84 40.5
COL.COLO4_34424 Corchorus olitorius HOM05D008852 ORTHO05D010731 4.1e-06 54.7 88 39.8
Manes.14G027000 Manihot esculenta HOM05D012645 ORTHO05D011500 4.1e-06 54.7 79 45.6
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 4.1e-06 54.7 87 39.1
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 5.4e-06 54.3 89 40.4
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 7.0e-06 53.9 89 40.4
Rhsim03G0179400 Rhododendron simsii HOM05D019148 ORTHO05D019092 7.0e-06 53.9 88 39.8
PGSC0003DMG400003065 Solanum tuberosum HOM05D008852 ORTHO05D010731 7.0e-06 53.9 77 42.9
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 9.2e-06 53.5 89 40.4


User provided reference genes

Program Settings