Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.5e-74 282.7 141 100.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.0e-67 258.1 142 91.5
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 2.3e-62 242.3 142 88.0
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 7.3e-61 237.3 142 85.2
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.2e-55 219.9 133 85.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.2e-55 219.9 133 85.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 6.0e-55 217.6 136 83.8
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 5.6e-53 211.1 125 80.0
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.3e-52 209.9 133 73.7
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 3.6e-52 208.4 142 71.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.8e-51 206.1 131 77.1
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.9e-51 204.1 131 76.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 9.0e-51 203.8 131 74.8
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.9e-49 198.7 129 73.6
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.8e-49 198.4 120 77.5
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 4.9e-49 198.0 132 73.5
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 4.9e-49 198.0 137 72.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 6.4e-49 197.6 135 69.6
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.9e-48 196.1 118 78.8
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 4.2e-48 194.9 144 72.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.6e-47 193.0 135 65.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.1e-47 192.6 136 65.4
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.5e-47 191.8 118 77.1
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 7.9e-47 190.7 131 72.5
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.0e-46 190.3 136 69.1
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.3e-46 189.9 133 67.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 5.1e-46 188.0 118 77.1
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 6.7e-46 187.6 129 69.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 6.7e-46 187.6 121 71.9
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 6.7e-46 187.6 118 74.6
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 8.7e-46 187.2 136 66.2
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.1e-45 186.8 131 72.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.5e-45 186.4 119 74.8
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.5e-45 186.4 139 68.3
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.5e-45 186.4 133 69.2
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.5e-45 186.4 117 76.9
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.5e-45 185.7 141 66.0
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.3e-45 185.3 133 68.4
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 3.3e-45 185.3 145 64.8
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 9.6e-45 183.7 133 67.7
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.3e-44 183.3 133 66.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.6e-44 183.0 133 67.7
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.6e-44 183.0 130 65.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.1e-44 182.6 122 70.5
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.1e-44 182.6 151 62.3
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 6.2e-44 181.0 127 70.9
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 6.2e-44 181.0 127 70.9
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 8.1e-44 180.6 118 76.3
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.4e-43 179.9 163 57.1
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.8e-43 179.5 134 64.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.1e-43 178.7 120 72.5
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.0e-43 178.3 122 71.3
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.0e-43 178.3 133 66.9
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 5.3e-43 177.9 126 73.8
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 9.0e-43 177.2 132 65.2
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 9.0e-43 177.2 131 64.9
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 9.0e-43 177.2 120 74.2
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.2e-42 176.8 120 69.2
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.0e-42 176.0 134 64.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.0e-42 176.0 139 61.9
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 2.0e-42 176.0 118 71.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 4.5e-42 174.9 120 71.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 7.6e-42 174.1 125 66.4
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.6e-42 174.1 118 71.2
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 7.6e-42 174.1 134 64.9
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 7.6e-42 174.1 127 65.4
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.0e-41 173.7 119 70.6
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.7e-41 172.9 118 74.6
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.7e-41 172.9 130 63.1
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.2e-41 172.6 118 72.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.8e-41 171.8 127 67.7
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.9e-41 171.4 118 70.3
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 4.9e-41 171.4 126 65.9
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 6.5e-41 171.0 125 69.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.4e-41 170.6 133 65.4
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.1e-40 170.2 127 66.9
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 5.5e-40 167.9 127 64.6
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 5.5e-40 167.9 127 63.0
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 5.5e-40 167.9 137 57.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 9.3e-40 167.2 128 66.4
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.6e-39 166.4 122 65.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.1e-39 166.0 143 58.0
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 7.9e-39 164.1 118 68.6
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.0e-38 163.7 146 54.1
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 8.7e-38 160.6 121 68.6
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.5e-37 159.1 120 65.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 3.3e-37 158.7 121 67.8
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 5.7e-37 157.9 121 66.9
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 7.4e-37 157.5 121 66.1
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 9.6e-37 157.1 120 66.7
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 9.6e-37 157.1 120 66.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.6e-36 156.4 119 64.7
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.1e-36 156.0 120 65.0
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.1e-36 156.0 120 65.0
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.1e-36 156.0 120 65.8
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.8e-36 155.6 120 65.0
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.4e-35 152.5 148 53.4
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.4e-35 152.5 130 58.5
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.1e-35 151.8 130 58.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.2e-34 150.2 120 63.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.0e-34 149.4 134 56.7
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 5.0e-33 144.8 85 78.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.5e-29 133.3 126 55.6
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.7e-29 131.3 118 57.6
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 8.2e-28 127.5 125 56.8
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.4e-27 126.7 136 49.3
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 5.3e-27 124.8 135 51.9
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.5e-24 115.9 71 74.6
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 8.2e-20 100.9 93 58.1
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.2e-18 97.1 143 38.5
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.4e-18 95.5 57 75.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 3.0e-14 82.4 84 54.8
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 5.2e-14 81.6 113 41.6
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 3.3e-13 79.0 50 70.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.1e-11 73.9 109 39.4


User provided reference genes

Program Settings