Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.2e-77 293.1 153 100.0
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.5e-70 267.7 150 93.3
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 9.4e-70 266.9 153 90.2
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 5.1e-68 261.2 152 91.4
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.6e-67 258.8 141 94.3
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.9e-63 245.4 150 86.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.9e-63 245.4 150 86.0
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 6.5e-63 244.2 150 84.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.5e-62 242.3 150 85.3
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 4.2e-62 241.5 154 82.5
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.1e-61 239.2 150 84.0
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 2.7e-61 238.8 150 83.3
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.6e-61 238.4 152 82.9
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.4e-60 236.5 148 83.1
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 3.0e-60 235.3 150 81.3
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 6.7e-60 234.2 150 81.3
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 8.8e-60 233.8 150 81.3
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 2.6e-59 232.3 148 80.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 7.5e-59 230.7 150 81.3
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 9.7e-59 230.3 150 80.7
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.2e-58 229.2 142 84.5
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.8e-58 228.0 125 88.8
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.3e-58 227.6 150 80.7
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.4e-57 226.5 152 77.0
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.8e-57 226.1 150 78.7
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.8e-57 226.1 147 80.3
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.4e-57 225.7 129 86.8
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 5.3e-57 224.6 142 82.4
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 9.1e-57 223.8 144 81.9
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.6e-56 223.0 150 78.7
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 2.0e-56 222.6 151 78.1
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.0e-56 222.6 142 81.7
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.7e-56 222.2 124 90.3
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 4.5e-56 221.5 150 78.0
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.5e-56 221.5 150 77.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 5.9e-56 221.1 150 80.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 7.7e-56 220.7 150 77.3
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 7.7e-56 220.7 150 77.3
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.3e-55 219.9 142 81.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.3e-55 219.9 150 77.3
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.3e-55 219.9 152 75.0
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.7e-55 219.5 142 81.0
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.9e-55 218.8 148 77.0
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.5e-55 217.6 151 77.5
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 6.5e-55 217.6 142 78.9
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.5e-54 216.5 151 74.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.5e-54 216.5 123 88.6
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 2.5e-54 215.7 123 88.6
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 2.5e-54 215.7 151 76.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 2.5e-54 215.7 150 74.7
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 3.2e-54 215.3 150 75.3
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 4.2e-54 214.9 151 73.5
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.5e-54 214.5 123 86.2
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 5.5e-54 214.5 135 80.0
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 7.2e-54 214.2 142 78.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 9.4e-54 213.8 150 74.0
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 9.4e-54 213.8 152 73.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-53 213.4 124 87.9
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.2e-53 213.4 150 75.3
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.2e-53 213.4 142 78.9
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.6e-53 211.8 150 74.7
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.6e-53 211.8 124 87.1
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 6.1e-53 211.1 145 77.9
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 6.1e-53 211.1 149 75.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 1.4e-52 209.9 142 77.5
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 139 80.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.8e-52 209.5 148 76.4
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 3.0e-52 208.8 152 71.7
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 4.0e-52 208.4 128 82.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 6.8e-52 207.6 151 76.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.2e-51 206.8 149 75.2
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.5e-51 206.5 153 71.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 4.4e-51 204.9 132 82.6
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 5.7e-51 204.5 116 87.9
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.7e-51 204.5 117 85.5
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 9.8e-51 203.8 116 90.5
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 9.8e-51 203.8 116 90.5
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 9.8e-51 203.8 116 90.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 9.8e-51 203.8 116 90.5
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 9.8e-51 203.8 116 87.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.7e-50 203.0 127 84.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.7e-50 203.0 117 86.3
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 123 82.1
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.7e-50 201.8 115 91.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.1e-49 200.3 124 84.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 113 91.2
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.1e-49 198.7 155 72.3
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 4.1e-49 198.4 118 86.4
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.1e-49 198.4 118 86.4
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 9.1e-49 197.2 117 86.3
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 4.0e-44 181.8 119 79.8
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.0e-44 181.8 144 68.1
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 3.4e-43 178.7 141 70.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.3e-42 174.1 124 74.2
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.6e-40 169.9 121 75.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.3e-39 166.8 120 72.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 2.3e-39 166.0 124 73.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.5e-38 163.3 104 76.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 4.3e-38 161.8 101 81.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 4.3e-38 161.8 104 76.0
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 5.6e-38 161.4 93 84.9
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.8e-37 159.1 123 69.9
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.8e-37 159.1 141 61.0
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 3.6e-37 158.7 125 68.8
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 2.3e-36 156.0 122 68.0
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.4e-35 152.1 110 70.9
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 7.0e-33 144.4 137 59.1
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.5e-32 142.1 93 75.3
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.0e-15 87.4 64 75.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 8.1e-13 77.8 68 54.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.2e-11 73.9 105 41.9
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 1.1e-06 57.4 107 36.4


User provided reference genes

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