Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G155800 Theobroma cacao HOM05D002915 ORTHO05D003004 7.1e-80 300.4 142 100.0
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 4.6e-47 191.4 134 69.4
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.8e-46 189.5 136 68.4
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 9.7e-45 183.7 129 69.0
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.5e-18 95.1 138 41.3
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 1.7e-17 93.2 128 36.7
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.1e-16 90.5 146 39.0
Dinv28571 Davidia involucrata HOM05D002915 ORTHO05D003004 4.2e-16 88.6 120 40.0
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 2.8e-15 85.9 128 38.3
CSS0048418 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.4e-14 83.6 148 37.8
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.8e-14 83.2 132 37.9
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.0e-14 82.0 137 37.2
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 5.2e-14 81.6 137 37.2
Migut.H01190 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.8e-14 81.3 133 36.8
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 6.8e-14 81.3 143 36.4
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 6.8e-14 81.3 142 35.9
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.8e-14 81.3 134 39.6
Migut.F00575 Erythranthe guttata HOM05D002915 ORTHO05D003004 8.9e-14 80.9 123 37.4
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.2e-13 80.5 132 37.9
PGSC0003DMG400043755 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.0e-13 79.7 120 38.3
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 3.4e-13 79.0 132 37.1
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.4e-13 79.0 136 36.8
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 4.4e-13 78.6 136 36.0
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 5.7e-13 78.2 141 36.9
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 5.7e-13 78.2 138 36.2
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.7e-12 76.6 134 35.8
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 2.8e-12 75.9 138 34.8
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.7e-12 75.5 137 34.3
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 3.7e-12 75.5 137 31.4
Aqoxy4G02259 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 8.3e-12 74.3 137 35.0
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 8.3e-12 74.3 132 36.4
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 1.1e-11 73.9 139 33.1
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 1.1e-11 73.9 124 37.1
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 1.4e-11 73.6 133 33.8
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.8e-11 73.2 102 39.2
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.8e-11 73.2 127 33.1
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 2.4e-11 72.8 138 34.8
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 2.4e-11 72.8 153 30.1
Peaxi162Scf00072g00109 Petunia axillaris HOM05D000002 ORTHO05D003004 3.1e-11 72.4 125 36.0
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 5.4e-11 71.6 127 37.0
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 7.0e-11 71.2 133 32.3
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 9.2e-11 70.9 137 34.3
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 9.2e-11 70.9 130 30.0
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 1.2e-10 70.5 132 31.8
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 1.2e-10 70.5 128 33.6
Eucgr.G01397 Eucalyptus grandis HOM05D002915 ORTHO05D003004 1.2e-10 70.5 104 37.5
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 1.6e-10 70.1 133 32.3
Eucgr.G01570 Eucalyptus grandis HOM05D002915 ORTHO05D003004 2.0e-10 69.7 121 33.9
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.0e-10 69.7 120 32.5
Eucgr.K00814 Eucalyptus grandis HOM05D002915 ORTHO05D003004 5.9e-10 68.2 108 34.3
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 1.3e-09 67.0 136 28.7
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.3e-09 67.0 153 28.8
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 1.7e-09 66.6 135 32.6
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 1.7e-09 66.6 135 32.6
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 2.3e-09 66.2 130 32.3
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 2.9e-09 65.9 154 29.2
Psat0s3757g0040 Pisum sativum HOM05D002915 ORTHO05D003004 2.9e-09 65.9 134 32.1
Lj1g0000366 Lotus japonicus HOM05D002915 ORTHO05D003004 3.8e-09 65.5 116 34.5
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 5.0e-09 65.1 144 31.2
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 8.6e-09 64.3 129 31.0
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 8.6e-09 64.3 145 32.4
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.9e-08 63.2 134 32.8
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 2.5e-08 62.8 138 32.6
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 2.5e-08 62.8 122 32.0
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 2.5e-08 62.8 133 28.6
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 3.3e-08 62.4 132 31.1
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 3.3e-08 62.4 144 31.2
PSO832G1209 Papaver somniferum HOM05D002915 ORTHO05D003004 3.3e-08 62.4 141 31.9
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 4.3e-08 62.0 133 29.3
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 5.6e-08 61.6 144 31.9
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 1.2e-07 60.5 123 31.7
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.6e-07 60.1 145 26.2
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.6e-07 60.1 145 26.2
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.6e-07 60.1 137 29.9
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 59.7 142 28.9
Psat0s6185g0040 Pisum sativum HOM05D002915 ORTHO05D003004 2.8e-07 59.3 134 30.6
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.7e-07 58.5 145 28.3
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 6.1e-07 58.2 132 32.6
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 8.0e-07 57.8 128 31.2
Glyma.17G083900 Glycine max HOM05D002915 ORTHO05D003004 1.4e-06 57.0 123 28.5
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-06 57.0 134 29.1
CSS0049349 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.8e-06 56.6 126 32.5
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.8e-06 56.6 132 30.3
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-06 56.6 126 32.5
FvH4_4g17961 Fragaria vesca HOM05D002915 ORTHO05D003004 2.3e-06 56.2 124 30.6
Lj6g0021938 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-06 56.2 99 32.3
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 2.3e-06 56.2 140 29.3
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 3.0e-06 55.8 132 27.3
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.0e-06 55.8 105 35.2
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 4.0e-06 55.5 117 33.3
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 4.0e-06 55.5 130 30.0
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 5.2e-06 55.1 127 33.9
Eucgr.G01391 Eucalyptus grandis HOM05D002915 ORTHO05D003004 5.2e-06 55.1 94 33.0
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 6.8e-06 54.7 132 30.3
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 8.9e-06 54.3 145 27.6
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 8.9e-06 54.3 89 33.7


User provided reference genes

Program Settings