Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G152300 Theobroma cacao HOM05D011629 ORTHO05D013267 1.5e-205 719.2 343 100.0
COL.COLO4_14086 Corchorus olitorius HOM05D011629 ORTHO05D013267 4.7e-77 292.4 393 45.0
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 4.0e-60 236.1 326 45.1
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 1.6e-21 107.8 414 26.8
COL.COLO4_14088 Corchorus olitorius HOM05D011629 ORTHO05D013267 2.8e-13 80.5 276 26.8
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 3.1e-12 77.0 198 32.3
Medtr3g011540 Medicago truncatula HOM05D011629 ORTHO05D013267 3.1e-12 77.0 182 31.9
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 6.9e-12 75.9 204 30.9
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 7.6e-11 72.4 182 31.9
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 6.4e-10 69.3 197 31.5
TPR.G3283 Trifolium pratense HOM05D011629 ORTHO05D013267 8.4e-10 68.9 184 28.3
Psat5g225160 Pisum sativum HOM05D011629 ORTHO05D013267 1.9e-09 67.8 198 31.8
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.2e-09 67.0 365 25.2
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 5.4e-09 66.2 207 29.5
Medtr4g009850 Medicago truncatula HOM05D011629 ORTHO05D013267 7.1e-09 65.9 181 31.5
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 9.3e-09 65.5 184 33.7
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.2e-08 65.1 196 31.6
Lsat_1_v5_gn_9_51281 Lactuca sativa HOM05D000664 ORTHO05D000491 1.2e-08 65.1 175 30.9
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 1.2e-08 65.1 195 28.2
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.2e-08 65.1 193 30.6
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.2e-08 65.1 193 30.6
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 6.0e-08 62.8 196 30.6
Os07g0535100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 6.0e-08 62.8 178 29.2
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 7.9e-08 62.4 177 27.7
Os07g0535200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.0e-07 62.0 178 29.2
CANSAT01G0762 Cannabis sativa HOM05D011629 ORTHO05D013267 2.3e-07 60.8 208 28.8
CANSAT01G1414 Cannabis sativa HOM05D011629 ORTHO05D013267 2.3e-07 60.8 208 28.8
Psat5g225320 Pisum sativum HOM05D011629 ORTHO05D013267 3.0e-07 60.5 196 27.6
TPR.G3308 Trifolium pratense HOM05D011629 ORTHO05D013267 3.9e-07 60.1 180 27.8
Lsat_1_v5_gn_9_51401 Lactuca sativa HOM05D000664 ORTHO05D000491 5.1e-07 59.7 177 28.2
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 6.7e-07 59.3 206 27.7
Lsat_1_v5_gn_9_51501 Lactuca sativa HOM05D000664 ORTHO05D000491 6.7e-07 59.3 263 27.0
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 6.7e-07 59.3 180 30.6
Lsat_1_v5_gn_9_51481 Lactuca sativa HOM05D000664 ORTHO05D000491 8.7e-07 58.9 174 29.9
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 3.3e-06 57.0 233 24.9
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 3.3e-06 57.0 196 30.6
Lsat_1_v5_gn_9_51601 Lactuca sativa HOM05D000664 ORTHO05D000491 4.3e-06 56.6 174 30.5
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 7.4e-06 55.8 197 27.4


User provided reference genes

Program Settings