Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 1.4e-150 536.2 267 100.0
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 2.8e-109 399.1 270 78.5
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 3.5e-104 382.1 271 77.1
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 5.2e-92 341.7 299 69.2
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 4.1e-89 332.0 267 68.2
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 5.3e-68 261.9 282 53.2
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 1.9e-57 226.9 278 48.9
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 2.1e-53 213.4 259 52.5
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 9.0e-52 208.0 258 50.8
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 1.5e-51 207.2 328 42.1
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 5.0e-50 202.2 294 45.9
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 2.5e-49 199.9 281 48.0
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 4.2e-49 199.1 310 43.2
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 5.5e-49 198.7 277 45.1
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 3.0e-47 193.0 312 43.3
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 5.1e-47 192.2 248 50.0
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 2.2e-45 186.8 274 45.6
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 5.9e-43 178.7 266 42.9
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 3.8e-42 176.0 243 44.9
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 5.0e-42 175.6 286 40.6
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.2e-40 171.0 281 40.9
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 2.7e-40 169.9 286 39.5
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 4.6e-40 169.1 232 48.7
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 2.0e-35 153.7 284 40.5
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 3.4e-35 152.9 283 38.9
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 1.0e-34 151.4 289 42.2
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 2.9e-34 149.8 289 36.7
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 6.5e-34 148.7 170 51.8
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 7.2e-33 145.2 290 36.2
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 1.6e-32 144.1 246 41.9
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 2.1e-32 143.7 300 37.3
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 2.1e-32 143.7 300 37.3
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 3.6e-32 142.9 282 35.1
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 4.7e-32 142.5 292 35.6
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 7.9e-32 141.7 285 36.8
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 7.9e-32 141.7 285 36.8
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.4e-31 141.0 273 39.6
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 5.1e-31 139.0 285 36.5
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 8.8e-31 138.3 177 48.6
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 1.1e-30 137.9 289 34.6
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 5.7e-30 135.6 279 36.9
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 7.4e-30 135.2 205 45.4
Gohir.A09G243850 Gossypium hirsutum HOM05D007687 ORTHO05D009692 1.3e-29 134.4 237 43.0
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 1.7e-29 134.0 285 35.4
THA.LOC104801051 Tarenaya hassleriana HOM05D007687 ORTHO05D009692 2.8e-29 133.3 283 35.7
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.7e-29 132.9 319 34.5
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 1.8e-28 130.6 283 35.0
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 1.8e-28 130.6 283 34.6
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 1.8e-28 130.6 285 34.7
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 9.1e-28 128.3 281 34.5
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 5.9e-27 125.6 209 45.5
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 1.0e-26 124.8 283 33.6
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 1.3e-26 124.4 218 39.0
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 2.5e-25 120.2 279 34.1
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 9.4e-25 118.2 236 38.1
Thhalv10015806m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.6e-24 117.5 269 34.6
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 1.6e-24 117.5 261 34.5
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 3.6e-24 116.3 253 36.4
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 2.0e-22 110.5 229 37.6
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 5.7e-22 109.0 274 31.4
BraA09t36360Z Brassica rapa HOM05D007687 ORTHO05D009692 5.7e-22 109.0 290 31.7
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 5.7e-22 109.0 233 36.1
A09p07100 Brassica napus HOM05D007687 ORTHO05D009692 7.5e-22 108.6 274 31.8
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 9.7e-22 108.2 292 31.2
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 9.7e-22 108.2 292 31.2
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 2.2e-21 107.1 230 41.3
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 3.7e-21 106.3 275 31.3
Carub.0008s2158 Capsella rubella HOM05D007687 ORTHO05D009692 6.3e-21 105.5 282 31.2
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 6.3e-21 105.5 178 41.0
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 1.8e-20 104.0 168 43.5
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 5.9e-19 99.0 170 43.5
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 7.7e-19 98.6 261 34.1
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 2.9e-18 96.7 175 41.1
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 1.1e-17 94.7 233 34.3
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 1.5e-17 94.4 259 32.4
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 4.2e-17 92.8 244 33.2
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 9.4e-17 91.7 269 30.9
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 2.1e-16 90.5 186 38.2
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 2.7e-16 90.1 186 38.2
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 1.4e-15 87.8 145 44.8
PGR031G0897 Punica granatum HOM05D007687 ORTHO05D009692 1.8e-15 87.4 221 32.6
TPR.G7811 Trifolium pratense HOM05D007687 ORTHO05D009692 4.0e-15 86.3 249 33.7
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 3.7e-13 79.7 180 35.0
Lsat_1_v5_gn_4_113740 Lactuca sativa HOM05D007687 ORTHO05D009692 2.9e-10 70.1 272 29.4
Aqoxy7G00617 Aquilegia oxysepala HOM05D035011 ORTHO05D031291 1.9e-09 67.4 153 34.0
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 3.2e-09 66.6 227 31.7
PSO782G3609 Papaver somniferum HOM05D035011 ORTHO05D031291 4.2e-09 66.2 242 27.3
PSO063G2070 Papaver somniferum HOM05D035011 ORTHO05D031291 5.5e-09 65.9 245 29.0
unitig_8.g4497 Utricularia gibba HOM05D007687 ORTHO05D009692 6.1e-08 62.4 239 27.6
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.8e-07 60.8 150 36.0
Medtr4g109910 Medicago truncatula HOM05D007687 ORTHO05D009692 8.8e-07 58.5 56 50.0
unitig_578.g15936 Utricularia gibba HOM05D007687 ORTHO05D009692 1.5e-06 57.8 252 27.0
AUR62003057 Chenopodium quinoa HOM05D003025 ORTHO05D003305 5.7e-06 55.8 51 56.9
AUR62007872 Chenopodium quinoa HOM05D003025 ORTHO05D003305 5.7e-06 55.8 51 56.9
arahy.Tifrunner.gnm1.ann1.0U0Y1K Arachis hypogaea HOM05D011573 ORTHO05D014451 9.8e-06 55.1 66 40.9


User provided reference genes

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