Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 5.6e-68 260.8 127 100.0
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 3.4e-65 251.5 126 93.7
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.9e-63 245.7 126 92.1
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.4e-63 245.4 126 92.1
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 2.4e-63 245.4 126 92.1
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 5.4e-63 244.2 126 91.3
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.9e-60 235.7 126 87.3
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 4.7e-59 231.1 126 84.9
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.7e-53 212.6 122 82.0
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 3.0e-53 211.8 122 82.0
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 3.9e-53 211.5 130 79.2
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 8.7e-53 210.3 122 79.5
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 2.5e-52 208.8 123 80.5
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.5e-52 208.8 121 81.0
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.5e-52 208.8 121 81.0
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 5.6e-52 207.6 124 79.8
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 1.6e-51 206.1 126 77.8
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.6e-51 206.1 126 77.0
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.8e-51 205.3 126 77.0
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 2.8e-51 205.3 126 75.4
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 6.2e-51 204.1 123 77.2
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 1.8e-50 202.6 122 74.6
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 1.8e-50 202.6 123 77.2
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 3.1e-50 201.8 123 76.4
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 6.9e-50 200.7 124 75.8
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 6.9e-50 200.7 127 74.0
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 9.0e-50 200.3 122 75.4
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.0e-49 199.1 122 77.9
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 2.0e-49 199.1 122 76.2
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 2.6e-49 198.7 126 73.8
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 3.4e-49 198.4 124 75.0
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 7.6e-49 197.2 119 79.0
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 7.6e-49 197.2 121 76.0
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.7e-48 196.1 124 74.2
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 1.7e-48 196.1 123 77.2
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 1.7e-48 196.1 124 75.8
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 2.2e-48 195.7 124 71.8
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.2e-48 195.7 126 76.2
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.9e-48 195.3 122 73.8
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 2.9e-48 195.3 122 73.8
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 3.8e-48 194.9 126 73.8
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.8e-48 194.9 120 76.7
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 4.9e-48 194.5 121 73.6
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.4e-48 194.1 126 74.6
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 8.4e-48 193.7 122 73.8
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-47 192.2 126 73.8
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 3.2e-47 191.8 122 73.8
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 3.2e-47 191.8 120 75.0
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 7.1e-47 190.7 122 73.8
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 9.3e-47 190.3 127 70.1
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 9.3e-47 190.3 122 72.1
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 1.2e-46 189.9 122 74.6
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.6e-46 189.5 122 72.1
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 3.5e-46 188.3 121 72.7
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 3.5e-46 188.3 122 73.8
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 6.0e-46 187.6 122 74.6
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 6.0e-46 187.6 124 74.2
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 1.0e-45 186.8 122 69.7
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.0e-45 186.8 122 68.9
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.3e-45 186.4 123 72.4
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.3e-45 186.4 121 71.1
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 1.7e-45 186.0 122 72.1
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.7e-45 186.0 122 72.1
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.7e-45 186.0 119 73.1
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 3.0e-45 185.3 126 69.0
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 1.1e-44 183.3 127 70.1
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 1.1e-44 183.3 119 74.8
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 1.1e-44 183.3 122 73.8
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 1.5e-44 183.0 124 71.8
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.9e-44 182.6 127 69.3
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.9e-44 182.6 127 69.3
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 1.9e-44 182.6 122 69.7
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 1.9e-44 182.6 119 75.6
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 2.5e-44 182.2 127 68.5
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 2.5e-44 182.2 127 68.5
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.5e-44 182.2 122 70.5
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 7.3e-44 180.6 127 67.7
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 2.1e-43 179.1 127 65.4
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 3.6e-43 178.3 124 68.5
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 4.8e-43 177.9 123 68.3
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 4.8e-43 177.9 124 68.5
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 6.2e-43 177.6 123 68.3
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 8.1e-43 177.2 124 66.9
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 1.1e-42 176.8 123 69.9
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 1.1e-42 176.8 123 69.9
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.1e-42 176.8 123 66.7
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 1.8e-42 176.0 123 68.3
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 2.4e-42 175.6 125 68.0
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 122 67.2
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 3.1e-42 175.3 122 68.9
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 3.1e-42 175.3 123 65.0
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 5.3e-42 174.5 123 67.5
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 9.0e-42 173.7 122 66.4
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 1.2e-41 173.3 123 65.9
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 2.0e-41 172.6 126 65.1
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 2.0e-41 172.6 122 65.6
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 2.6e-41 172.2 124 69.4
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.6e-41 172.2 122 63.9
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 5.8e-41 171.0 123 65.0
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.8e-41 171.0 122 63.1
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 1.3e-40 169.9 100 80.0
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 1.3e-40 169.9 121 65.3
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 1.3e-40 169.9 124 66.1
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.3e-40 169.9 121 66.1
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 1.3e-40 169.9 126 62.7
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 2.9e-40 168.7 129 61.2
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 6.4e-40 167.5 123 64.2
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 3.2e-39 165.2 120 67.5
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 6.0e-38 161.0 125 60.0
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.1e-37 157.9 121 60.3
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 9.6e-36 153.7 129 58.9
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.3e-35 153.3 79 87.3
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.3e-35 153.3 122 59.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.1e-31 140.2 94 69.1
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 3.5e-30 135.2 81 79.0
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 4.3e-28 128.3 122 53.3
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 9.6e-28 127.1 82 69.5
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 2.4e-26 122.5 122 52.5
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 2.0e-25 119.4 94 60.6
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 2.6e-25 119.0 113 53.1
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 6.5e-24 114.4 113 52.2
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 4.8e-19 98.2 85 55.3
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 8.2e-19 97.4 73 65.8
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.2e-17 93.6 64 64.1
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 4.5e-17 91.7 118 44.9
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 4.5e-17 91.7 69 62.3
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 5.9e-17 91.3 134 40.3
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 3.2e-15 85.5 69 56.5
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 7.2e-15 84.3 131 34.4
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 6.1e-14 81.3 65 53.8
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 1.7e-11 73.2 62 61.3
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 2.2e-11 72.8 70 47.1
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 4.8e-11 71.6 77 42.9
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 1.4e-10 70.1 102 34.3
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 6.9e-10 67.8 120 36.7
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 2.9e-08 62.4 62 43.5
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 3.8e-08 62.0 77 41.6
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 3.8e-08 62.0 99 38.4
PRCOL_00003291 Prasinoderma coloniale HOM05D005465 ORTHO05D006612 1.6e-06 56.6 68 42.6


User provided reference genes

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