Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 4.4e-152 541.2 260 100.0
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 2.0e-133 479.2 260 90.0
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 5.2e-129 464.5 244 91.4
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 4.6e-117 424.9 256 79.3
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 8.6e-116 420.6 255 76.5
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 9.5e-115 417.2 255 74.1
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 3.6e-114 415.2 253 75.5
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 8.1e-114 414.1 247 78.9
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.1e-113 413.7 257 77.0
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.8e-113 412.9 259 74.9
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 2.6e-112 409.1 255 74.9
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 3.4e-112 408.7 291 69.4
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 4.9e-111 404.8 256 75.0
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.4e-111 404.1 256 74.6
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 8.4e-111 404.1 256 75.0
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 1.4e-110 403.3 243 77.4
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 2.1e-109 399.4 254 73.2
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 2.7e-109 399.1 243 77.0
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 3.5e-109 398.7 226 80.5
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.6e-109 398.3 256 73.8
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 4.6e-109 398.3 260 71.9
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 7.8e-109 397.5 251 74.5
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 1.3e-108 396.7 255 72.9
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 1.7e-108 396.4 249 73.1
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 6.6e-108 394.4 255 72.9
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.6e-106 389.8 255 73.7
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 8.1e-106 387.5 254 70.9
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 2.4e-105 386.0 249 72.7
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.4e-105 386.0 252 69.8
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 3.1e-105 385.6 250 72.4
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 1.2e-104 383.6 255 70.6
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.5e-104 383.3 254 70.9
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.5e-104 383.3 259 71.0
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 2.0e-104 382.9 256 69.5
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 3.4e-104 382.1 247 72.1
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 3.4e-104 382.1 255 70.6
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.4e-104 381.7 259 70.7
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 7.6e-104 380.9 253 69.6
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 7.6e-104 380.9 255 70.2
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 9.9e-104 380.6 259 70.7
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-103 380.2 253 70.8
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.3e-103 380.2 269 69.9
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 1.3e-103 380.2 254 71.7
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 1.7e-103 379.8 239 71.5
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 2.9e-103 379.0 257 68.9
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 6.4e-103 377.9 242 70.2
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 8.4e-103 377.5 259 70.3
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 1.4e-102 376.7 246 70.7
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 3.2e-102 375.6 245 71.0
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 7.1e-102 374.4 253 68.8
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 9.3e-102 374.0 254 69.7
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 9.3e-102 374.0 257 66.1
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.6e-101 373.2 242 69.8
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.3e-100 370.2 242 69.8
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.3e-100 369.4 263 66.5
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 1.5e-99 366.7 253 68.4
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 1.9e-99 366.3 248 69.0
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 1.9e-99 366.3 253 67.6
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 4.3e-99 365.2 251 64.5
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 5.6e-99 364.8 240 70.0
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 5.6e-99 364.8 239 69.5
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 9.6e-99 364.0 270 64.1
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 1.3e-98 363.6 250 68.0
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.3e-98 363.6 253 67.2
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 3.6e-98 362.1 259 65.6
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 3.6e-98 362.1 226 74.8
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 1.1e-97 360.5 240 67.1
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 1.4e-97 360.1 205 85.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.4e-97 360.1 245 65.3
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 1.4e-97 360.1 245 64.9
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 1.8e-97 359.8 248 62.5
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 2.4e-97 359.4 245 65.7
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 2.4e-97 359.4 248 62.1
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 3.1e-97 359.0 232 70.7
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 4.0e-97 358.6 245 63.7
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 5.3e-97 358.2 256 62.9
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 6.9e-97 357.8 256 62.9
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 9.0e-97 357.5 204 84.3
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 2.0e-96 356.3 245 63.7
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 2.6e-96 355.9 250 62.8
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 2.6e-96 355.9 250 62.8
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 2.6e-96 355.9 256 62.9
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 3.4e-96 355.5 253 66.0
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 2.2e-95 352.8 306 56.9
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 2.9e-95 352.4 281 59.1
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 3.8e-95 352.1 244 64.8
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 3.2e-94 349.0 254 61.4
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 3.2e-94 349.0 256 60.9
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 5.4e-94 348.2 256 61.7
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 7.1e-94 347.8 256 63.3
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 1.6e-93 346.7 254 61.0
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 2.1e-93 346.3 246 62.2
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 7.9e-93 344.4 256 62.1
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 7.9e-93 344.4 256 60.9
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 2.3e-92 342.8 252 63.1
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 3.0e-92 342.4 245 67.8
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 5.1e-92 341.7 252 61.1
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 6.7e-92 341.3 250 62.4
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.7e-92 341.3 254 63.0
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.7e-92 341.3 254 63.0
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 1.5e-91 340.1 246 61.4
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 1.5e-91 340.1 246 61.4
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 4.3e-91 338.6 250 62.0
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 5.6e-91 338.2 250 61.6
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 2.1e-90 336.3 251 62.2
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 3.7e-90 335.5 250 61.2
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 4.8e-90 335.1 254 65.0
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 1.4e-89 333.6 250 61.2
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.4e-89 333.6 252 61.5
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 1.3e-84 317.0 277 56.0
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.5e-83 313.5 202 72.8
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 1.8e-81 306.6 168 82.1
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 2.6e-80 302.8 188 74.5
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 1.7e-79 300.1 232 59.9
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 6.0e-77 291.6 188 67.0
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.5e-75 286.2 257 54.9
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 4.8e-74 282.0 250 53.2
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 2.4e-73 279.6 252 54.4
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.3e-71 273.9 229 54.6
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 1.4e-70 270.4 251 53.0
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 6.1e-69 265.0 241 54.8
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 7.4e-67 258.1 204 55.9
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.1e-65 254.2 194 60.3
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.8e-65 253.4 236 50.0
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.1e-62 244.2 143 82.5
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 6.1e-61 238.4 170 60.6
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 5.1e-60 235.3 254 48.0
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 4.4e-59 232.3 128 81.2
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 4.1e-57 225.7 189 55.0
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 4.5e-56 222.2 209 50.7
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 2.1e-53 213.4 130 75.4
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.7e-50 203.8 126 74.6
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.1e-49 201.1 255 44.3
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.0e-44 182.6 281 38.1
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 8.8e-44 181.4 112 72.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.2e-43 181.0 194 50.5
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 1.7e-42 177.2 128 60.2
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 2.2e-42 176.8 138 60.9
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 2.8e-42 176.4 222 40.5
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 9.1e-41 171.4 123 64.2
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 5.9e-40 168.7 289 33.9
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.2e-30 136.0 102 63.7
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 3.0e-28 129.8 79 73.4
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 3.5e-24 116.3 65 76.9
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.7e-21 105.9 99 49.5
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 4.1e-17 92.8 60 68.3
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 7.3e-14 82.0 69 55.1
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.6e-08 64.3 229 25.8
Ah.04g150580 Amaranthus hybridus HOM05D004915 ORTHO05D006048 4.6e-08 62.8 58 55.2


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