Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 0.0e+00 1332.4 750 100.0
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 7.6e-290 1000.3 668 79.8
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 3.9e-278 961.4 676 76.9
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 6.7e-278 960.7 676 76.8
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.8e-276 955.3 752 75.0
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 2.7e-234 815.8 722 65.5
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 1.0e-185 654.4 770 54.5
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 1.3e-175 620.9 742 52.4
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 6.9e-174 615.1 681 55.2
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 2.1e-170 603.6 676 54.9
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 2.7e-170 603.2 733 52.3
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 2.3e-169 600.1 737 51.0
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 3.3e-168 596.3 710 51.5
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 9.6e-168 594.7 690 54.9
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 2.1e-167 593.6 845 47.8
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.2e-163 579.3 717 50.8
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 3.9e-161 572.8 490 63.3
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.9e-160 570.5 714 51.8
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.3e-159 567.8 672 53.4
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.6e-159 567.4 668 53.9
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 1.6e-159 567.4 819 46.2
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 2.8e-159 566.6 489 64.0
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 2.4e-158 563.5 665 53.4
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 2.4e-158 563.5 490 63.9
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 6.9e-158 562.0 818 46.2
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.6e-157 560.1 695 50.9
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 1.0e-156 558.1 709 49.8
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.3e-156 557.8 708 50.3
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 2.2e-156 557.0 637 53.1
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 2.9e-156 556.6 667 51.6
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 4.2e-155 552.7 488 62.9
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 5.5e-155 552.4 676 52.1
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.6e-154 549.3 707 50.1
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.3e-153 547.7 846 45.9
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 1.3e-153 547.7 649 51.2
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.3e-153 547.7 496 61.9
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.3e-153 547.0 710 50.1
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 1.5e-152 544.3 486 61.3
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.9e-152 543.9 480 62.3
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 2.5e-152 543.5 483 62.5
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 4.3e-152 542.7 691 51.8
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 1.3e-151 541.2 496 58.7
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 4.8e-151 539.3 621 54.8
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 1.2e-149 534.6 666 50.6
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 4.5e-149 532.7 665 51.3
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 7.7e-149 531.9 488 62.1
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 7.7e-149 531.9 857 45.0
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 2.2e-148 530.4 686 50.0
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 3.8e-148 529.6 510 57.3
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 5.0e-148 529.3 764 47.9
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 8.5e-148 528.5 510 57.5
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 8.5e-148 528.5 810 45.2
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 2.7e-146 523.5 680 49.6
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.4e-145 521.2 494 60.1
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 3.0e-145 520.0 694 47.4
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 4.8e-143 512.7 705 46.8
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.4e-142 511.1 750 46.9
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 2.0e-141 507.3 923 40.8
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 7.7e-141 505.4 706 48.0
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 1.0e-140 505.0 485 60.4
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 5.0e-140 502.7 480 58.5
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 1.4e-139 501.1 486 59.3
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 9.4e-139 498.4 495 59.2
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 2.7e-138 496.9 732 46.2
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 2.7e-138 496.9 674 50.9
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.3e-137 493.8 490 58.6
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 3.9e-137 493.0 680 46.8
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.1e-136 491.5 740 45.1
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 8.2e-135 485.3 790 43.4
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 1.1e-134 485.0 459 59.9
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 7.0e-134 482.3 504 55.0
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.2e-133 481.5 492 56.7
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 1.7e-132 477.6 669 47.2
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 6.5e-132 475.7 415 61.0
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 1.5e-131 474.6 677 45.8
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 1.9e-131 474.2 398 63.1
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 4.2e-131 473.0 669 47.2
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 1.6e-130 471.1 668 46.3
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 4.7e-130 469.5 398 63.1
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 1.2e-128 464.9 450 57.6
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 9.7e-128 461.8 397 62.0
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 4.8e-127 459.5 486 55.6
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 1.6e-125 454.5 415 59.5
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 1.0e-124 451.8 474 54.6
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 2.9e-124 450.3 660 45.9
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.9e-124 450.3 652 45.6
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 6.5e-124 449.1 653 45.6
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 3.0e-121 440.3 492 53.9
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 1.5e-120 438.0 501 53.9
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 5.7e-120 436.0 503 51.5
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 6.3e-119 432.6 709 42.7
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 1.8e-118 431.0 680 43.7
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 5.5e-115 419.5 500 50.8
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 9.5e-115 418.7 475 51.6
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.2e-114 418.3 401 57.1
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 6.1e-114 416.0 687 44.5
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 2.0e-109 401.0 627 42.1
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 2.3e-105 387.5 503 48.5
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 1.1e-99 368.6 687 39.7
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 8.9e-97 359.0 293 64.2
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.2e-96 358.6 306 68.3
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 2.2e-95 354.4 394 52.8
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 2.3e-92 344.4 347 56.2
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 1.4e-81 308.5 473 42.1
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 2.4e-70 271.2 373 46.9
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.8e-42 177.9 208 44.2
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 5.5e-38 163.7 272 42.3
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.8e-36 158.7 169 52.1
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 2.8e-34 151.4 112 65.2
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 1.2e-29 136.0 112 63.4
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 6.1e-21 107.1 71 77.5
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 7.4e-19 100.1 87 66.7
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 2.0e-16 92.0 82 59.8
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 6.5e-15 87.0 82 58.5
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.1e-09 68.2 132 40.2


User provided reference genes

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