Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 5.3e-75 284.3 143 100.0
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 7.7e-42 174.1 145 69.7
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 4.4e-37 158.3 145 62.8
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 3.7e-36 155.2 145 62.1
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 3.1e-35 152.1 145 62.1
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 1.5e-32 143.3 96 77.1
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 6.1e-31 137.9 135 56.3
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 4.0e-30 135.2 132 58.3
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.5e-29 133.3 138 58.7
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.9e-28 129.0 132 52.3
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 8.3e-28 127.5 133 51.9
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 8.3e-28 127.5 133 51.9
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 9.2e-27 124.0 138 53.6
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 9.2e-27 124.0 134 52.2
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 4.3e-24 115.2 134 52.2
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 7.3e-24 114.4 119 51.3
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.6e-23 113.2 136 48.5
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 1.2e-21 107.1 134 50.0
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.2e-21 107.1 134 44.0
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 1.5e-21 106.7 114 53.5
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 4.4e-21 105.1 136 44.9
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 3.7e-20 102.1 132 47.0
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 4.9e-20 101.7 134 44.0
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.4e-19 100.1 134 43.3
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 8.6e-17 90.9 132 40.2
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 3.3e-16 89.0 131 45.8
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 9.5e-16 87.4 120 42.5
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 2.1e-15 86.3 107 47.7
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 4.0e-14 82.0 140 40.0
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 5.2e-14 81.6 135 42.2
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 2.2e-12 76.3 124 40.3
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 9.2e-11 70.9 126 37.3
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 1.6e-10 70.1 136 36.8
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 6.0e-10 68.2 128 35.9
Sc04g0008740 Simmondsia chinensis HOM05D017674 ORTHO05D019531 2.3e-09 66.2 168 30.4
ECA246G1381 Erigeron canadensis HOM05D009197 ORTHO05D010857 1.1e-08 63.9 123 35.8
Manes.06G099001 Manihot esculenta HOM05D009197 ORTHO05D010857 1.1e-08 63.9 95 42.1
Nitab4.5_0011499g0020 Nicotiana tabacum HOM05D041172 ORTHO05D035185 1.1e-08 63.9 118 36.4
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 1.9e-08 63.2 118 36.4
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 9.5e-08 60.8 111 36.9
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 1.6e-07 60.1 133 32.3
PGSC0003DMG400022605 Solanum tuberosum HOM05D041172 ORTHO05D035185 3.6e-07 58.9 126 31.0
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 6.2e-07 58.2 131 34.4
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 1.1e-06 57.4 129 31.0
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 1.8e-06 56.6 150 33.3
Hund05938 Selenicereus undatus HOM05D017674 ORTHO05D019531 3.1e-06 55.8 164 28.7
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 4.0e-06 55.5 129 31.8


User provided reference genes

Program Settings