Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.2e-117 426.4 205 100.0
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 3.4e-83 312.0 165 88.5
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 8.4e-82 307.4 164 87.8
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 8.4e-74 280.8 164 79.3
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.2e-73 278.9 164 78.0
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.5e-70 270.0 164 74.4
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 1.6e-69 266.5 164 75.6
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 8.1e-69 264.2 164 75.6
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.4e-68 263.5 164 73.8
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 2.4e-68 262.7 164 73.8
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 6.9e-68 261.2 164 75.6
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.4e-67 258.8 165 72.1
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 1.7e-66 256.5 162 74.7
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 2.9e-66 255.8 165 71.5
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.1e-65 253.8 164 73.2
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.4e-65 253.4 164 73.2
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 3.2e-65 252.3 164 69.5
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 4.2e-65 251.9 164 72.6
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 5.5e-65 251.5 162 76.5
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 9.3e-65 250.8 164 70.7
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 2.1e-64 249.6 173 70.5
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 3.5e-64 248.8 164 68.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 3.5e-64 248.8 164 73.2
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.3e-63 246.9 167 68.3
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.3e-63 246.9 164 68.3
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 1.3e-63 246.9 160 70.6
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 3.0e-63 245.7 160 71.2
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 3.0e-63 245.7 160 71.2
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 3.0e-63 245.7 164 68.9
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.9e-63 245.4 167 67.1
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 3.9e-63 245.4 164 68.3
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 3.9e-63 245.4 171 66.7
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 8.7e-63 244.2 160 70.6
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 1.1e-62 243.8 164 68.3
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 1.1e-62 243.8 164 70.1
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 1.9e-62 243.0 164 67.7
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 2.5e-62 242.7 164 69.5
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 3.3e-62 242.3 163 69.3
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 4.3e-62 241.9 164 67.7
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 5.7e-62 241.5 164 68.9
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 5.7e-62 241.5 164 70.1
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 9.6e-62 240.7 165 69.7
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 2.1e-61 239.6 171 65.5
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 4.8e-61 238.4 164 67.1
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 6.3e-61 238.0 160 69.4
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 6.3e-61 238.0 164 68.9
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 8.2e-61 237.7 164 68.3
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 4.1e-60 235.3 160 70.0
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 4.1e-60 235.3 164 66.5
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 1.2e-59 233.8 164 64.6
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 2.0e-59 233.0 177 62.1
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 7.6e-59 231.1 164 68.3
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 1.0e-58 230.7 162 67.3
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 1.0e-58 230.7 165 66.7
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.3e-58 230.3 179 62.0
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 3.2e-57 225.7 164 63.4
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 9.3e-57 224.2 164 65.9
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 9.3e-57 224.2 164 65.9
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 9.3e-57 224.2 164 65.9
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 2.1e-56 223.0 164 65.9
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 4.6e-56 221.9 164 64.6
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 3.9e-55 218.8 164 62.2
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 6.7e-55 218.0 159 64.2
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.5e-54 216.1 163 63.2
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 5.7e-54 214.9 163 63.2
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 8.2e-53 211.1 175 61.1
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 3.1e-52 209.1 121 80.2
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.3e-52 208.4 162 61.1
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 6.9e-52 208.0 170 62.9
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.0e-50 204.1 163 61.3
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 3.8e-50 202.2 195 54.4
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.6e-48 196.8 158 60.1
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 1.5e-46 190.3 121 72.7
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.0e-46 189.9 174 54.0
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 5.7e-46 188.3 174 53.4
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 6.3e-45 184.9 164 56.1
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.8e-44 183.3 206 49.5
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 4.1e-44 182.2 165 53.9
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 9.1e-44 181.0 128 64.1
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.3e-42 177.2 153 52.3
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.9e-41 173.3 129 65.1
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 1.6e-40 170.2 124 62.9
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 6.7e-39 164.9 164 44.5
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 8.8e-39 164.5 149 57.0
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 3.5e-35 152.5 183 44.3
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 5.7e-30 135.2 83 72.3
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 7.0e-28 128.3 81 74.1
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 9.1e-28 127.9 224 36.6
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 1.2e-27 127.5 172 35.5
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 1.6e-27 127.1 79 75.9
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 2.0e-27 126.7 164 42.7
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.2e-25 119.4 74 70.3
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 1.2e-22 110.9 149 43.6
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.4e-22 109.4 74 64.9
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 2.2e-21 106.7 170 35.9
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 6.3e-21 105.1 74 64.9
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 1.7e-13 80.5 101 40.6
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 8.3e-13 78.2 75 54.7
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 2.7e-11 73.2 86 46.5
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.0e-07 61.2 39 69.2
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.0e-07 59.7 41 65.9


User provided reference genes

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