Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G065600 Theobroma cacao HOM05D000839 ORTHO05D000664 8.2e-70 266.9 133 100.0
Manes.10G078400 Manihot esculenta HOM05D000839 ORTHO05D000664 1.7e-27 126.3 220 38.2
Gohir.A12G271600 Gossypium hirsutum HOM05D000839 ORTHO05D000664 1.5e-26 123.2 213 37.6
Gohir.D12G272300 Gossypium hirsutum HOM05D000839 ORTHO05D000664 1.9e-26 122.9 213 37.6
Gorai.008G292800 Gossypium raimondii HOM05D000839 ORTHO05D000664 2.5e-26 122.5 213 37.6
Lj9C349T8 Lonicera japonica HOM05D000839 ORTHO05D000664 2.5e-26 122.5 205 39.0
Ciclev10019486m.g Citrus clementina HOM05D000839 ORTHO05D000664 5.5e-26 121.3 209 38.3
Aqoxy3G04190 Aquilegia oxysepala HOM05D000839 ORTHO05D000664 1.2e-25 120.2 214 36.9
TWI60G1128 Tripterygium wilfordii HOM05D000839 ORTHO05D000664 1.2e-25 120.2 220 37.3
COL.COLO4_24459 Corchorus olitorius HOM05D000839 ORTHO05D000664 2.1e-25 119.4 218 38.1
Cpa.g.sc111.35 Carica papaya HOM05D000839 ORTHO05D000664 3.6e-25 118.6 211 38.4
Gohir.A12G271500 Gossypium hirsutum HOM05D000839 ORTHO05D000664 3.6e-25 118.6 202 38.1
Lj5C166T7 Lonicera japonica HOM05D000839 ORTHO05D000664 8.0e-25 117.5 214 35.5
DCAR_014741 Daucus carota HOM05D000839 ORTHO05D000664 1.0e-24 117.1 203 38.9
Actinidia18875 Actinidia chinensis HOM05D000839 ORTHO05D000664 4.0e-24 115.2 217 36.9
Gohir.D12G272200 Gossypium hirsutum HOM05D000839 ORTHO05D000664 6.8e-24 114.4 200 37.0
Phvul.004G142000 Phaseolus vulgaris HOM05D000839 ORTHO05D000664 6.8e-24 114.4 218 39.4
arahy.Tifrunner.gnm1.ann1.KP4XCV Arachis hypogaea HOM05D000839 ORTHO05D000664 8.8e-24 114.0 216 34.3
Gorai.008G292600 Gossypium raimondii HOM05D000839 ORTHO05D000664 8.8e-24 114.0 199 37.2
Glyma.16G216500 Glycine max HOM05D000839 ORTHO05D000664 4.4e-23 111.7 217 35.5
TAR371G1201 Trochodendron aralioides HOM05D000839 ORTHO05D000664 4.4e-23 111.7 215 35.8
arahy.Tifrunner.gnm1.ann1.09Z0E1 Arachis hypogaea HOM05D000839 ORTHO05D000664 5.7e-23 111.3 216 33.8
arahy.Tifrunner.gnm1.ann1.GK8DAQ Arachis hypogaea HOM05D000839 ORTHO05D000664 5.7e-23 111.3 217 34.1
Hma1.2p1_1404F.1_g281350 Hydrangea macrophylla HOM05D000839 ORTHO05D000664 9.8e-23 110.5 207 37.2
GSVIVG01012912001 Vitis vinifera HOM05D000839 ORTHO05D000664 9.8e-23 110.5 208 34.6
Eucgr.K02307 Eucalyptus grandis HOM05D000839 ORTHO05D000664 1.7e-22 109.8 216 34.3
MBI03_g24039_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 2.2e-22 109.4 184 43.5
Atru.chr9.265 Acer truncatum HOM05D000839 ORTHO05D000664 1.1e-21 107.1 220 34.5
Glyma.09G166400 Glycine max HOM05D000839 ORTHO05D000664 1.1e-21 107.1 222 35.6
Potri.012G037400 Populus trichocarpa HOM05D000839 ORTHO05D000664 1.1e-21 107.1 219 34.2
Oeu023546.1 Olea europaea HOM05D000839 ORTHO05D000664 1.8e-21 106.3 161 41.6
MBI03_g44020_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 3.1e-21 105.5 205 38.5
Sabra15G0024400 Salix brachista HOM05D000839 ORTHO05D000664 3.1e-21 105.5 219 32.9
Migut.O00252 Erythranthe guttata HOM05D000839 ORTHO05D000664 5.4e-21 104.8 215 34.0
Potri.015G029400 Populus trichocarpa HOM05D000839 ORTHO05D000664 3.5e-20 102.1 219 33.3
SGA_v2.0_scaffold25G10755 Striga asiatica HOM05D000839 ORTHO05D000664 3.5e-20 102.1 205 34.6
PGR044G1739 Punica granatum HOM05D000839 ORTHO05D000664 4.5e-20 101.7 212 34.0
Sabra15G0024600 Salix brachista HOM05D000839 ORTHO05D000047 7.7e-20 100.9 219 32.9
ATR0618G308 Amborella trichopoda HOM05D000839 ORTHO05D000664 2.3e-19 99.4 203 34.0
MSTRG.11551 Avicennia marina HOM05D000839 ORTHO05D000664 2.3e-19 99.4 216 32.4
AUR62037981 Chenopodium quinoa HOM05D000839 ORTHO05D000664 2.3e-19 99.4 206 33.5
Cc04_g08760 Coffea canephora HOM05D000839 ORTHO05D000664 2.9e-19 99.0 207 33.8
Aa31LG4G3510 Aethionema arabicum HOM05D000839 ORTHO05D000664 1.9e-18 96.3 213 31.0
C06p47360 Brassica napus HOM05D000839 ORTHO05D000664 3.3e-18 95.5 215 33.0
BolC6t39775H Brassica oleracea HOM05D000839 ORTHO05D000664 3.3e-18 95.5 215 33.0
BcaB03g15034 Brassica carinata HOM05D000839 ORTHO05D000664 5.5e-18 94.7 215 32.6
THA.LOC104810633 Tarenaya hassleriana HOM05D000839 ORTHO05D000664 5.5e-18 94.7 213 33.3
A07p39170 Brassica napus HOM05D000839 ORTHO05D000664 7.2e-18 94.4 215 32.6
BolC2t09136H Brassica oleracea HOM05D000839 ORTHO05D000664 7.2e-18 94.4 210 32.9
BraA07t31466Z Brassica rapa HOM05D000839 ORTHO05D000664 7.2e-18 94.4 215 32.6
AUR62019711 Chenopodium quinoa HOM05D000839 ORTHO05D000664 9.5e-18 94.0 162 36.4
EL10Ac4g08469 Beta vulgaris HOM05D000839 ORTHO05D000664 1.2e-17 93.6 205 34.1
AT1G73220 Arabidopsis thaliana HOM05D000839 ORTHO05D000664 1.6e-17 93.2 213 33.8
AL2G32990 Arabidopsis lyrata HOM05D000839 ORTHO05D000664 2.1e-17 92.8 213 33.3
A02p18620 Brassica napus HOM05D000839 ORTHO05D000664 2.1e-17 92.8 212 32.1
Carub.0002s2002 Capsella rubella HOM05D000839 ORTHO05D000664 2.8e-17 92.4 204 33.3
CARHR066230 Cardamine hirsuta HOM05D000839 ORTHO05D000664 4.7e-17 91.7 203 33.0
BraA02t06905Z Brassica rapa HOM05D000839 ORTHO05D000664 8.0e-17 90.9 212 31.6
Thhalv10018374m.g Eutrema salsugineum HOM05D000839 ORTHO05D000664 1.0e-16 90.5 203 33.0
BraA02t06902Z Brassica rapa HOM05D000839 ORTHO05D000664 1.4e-16 90.1 212 31.1
Sabra12G0025900 Salix brachista HOM05D000839 ORTHO05D000664 1.4e-16 90.1 207 31.9
C02p30830 Brassica napus HOM05D000839 ORTHO05D000664 1.8e-16 89.7 212 31.1
DCAR_027169 Daucus carota HOM05D000839 ORTHO05D000664 2.3e-16 89.4 216 29.6
BolC2t09135H Brassica oleracea HOM05D000839 ORTHO05D000664 3.0e-16 89.0 210 31.4
Sp5g28190 Schrenkiella parvula HOM05D000839 ORTHO05D000664 5.2e-16 88.2 204 32.4
Ah.04g163850 Amaranthus hybridus HOM05D000470 ORTHO05D000348 1.2e-15 87.0 204 33.8
Nn4g24824 Nelumbo nucifera HOM05D000839 ORTHO05D000664 1.5e-15 86.7 159 36.5
SEGI_40521 Sequoiadendron giganteum HOM05D000839 ORTHO05D000664 2.0e-15 86.3 212 31.6
VMungo0464G0935 Vigna mungo HOM05D000839 ORTHO05D000664 9.2e-13 77.4 151 37.1
unitig_8.g3869 Utricularia gibba HOM05D000839 ORTHO05D000664 1.2e-12 77.0 161 33.5
SHI24561 Sapria himalayana HOM05D000839 ORTHO05D000664 5.9e-12 74.7 154 37.0
C02p30850 Brassica napus HOM05D000839 ORTHO05D000664 2.5e-10 69.3 141 34.0
SEGI_27456 Sequoiadendron giganteum HOM05D000839 ORTHO05D000664 4.0e-08 62.0 203 24.1


User provided reference genes

Program Settings