Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 0.0e+00 1198.7 684 100.0
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 0.0e+00 1096.6 684 88.9
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 0.0e+00 1096.3 684 88.9
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 0.0e+00 1090.9 684 88.6
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 0.0e+00 1089.3 684 88.7
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.1e-306 1056.2 685 85.8
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 1.2e-305 1052.7 685 84.2
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 7.6e-305 1050.0 685 84.2
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 2.9e-304 1048.1 684 86.0
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 4.2e-303 1044.3 681 84.4
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 8.7e-301 1036.6 686 82.9
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 9.7e-300 1033.1 684 83.6
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 1.3e-299 1032.7 684 82.5
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 1.4e-298 1029.2 684 82.7
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 9.0e-298 1026.5 681 82.8
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 1.5e-297 1025.8 680 85.9
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 2.6e-297 1025.0 684 82.7
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 6.5e-296 1020.4 683 82.4
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 1.1e-295 1019.6 655 85.0
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 1.4e-295 1019.2 689 82.4
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 1.9e-295 1018.8 685 82.5
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 3.2e-295 1018.1 681 83.3
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 7.2e-295 1016.9 685 81.9
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 2.1e-294 1015.4 683 81.6
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 6.1e-294 1013.8 688 81.4
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 7.9e-294 1013.4 689 83.2
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 2.3e-293 1011.9 681 81.9
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 5.7e-292 1007.3 691 81.0
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 7.4e-292 1006.9 691 80.3
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 9.7e-292 1006.5 687 80.6
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 1.7e-291 1005.7 680 83.2
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 2.8e-291 1005.0 685 80.6
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 2.8e-291 1005.0 682 80.9
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 4.8e-291 1004.2 685 82.2
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 1.1e-290 1003.0 744 75.5
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 689 79.7
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 690 79.4
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 680 81.9
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 744 75.5
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 3.1e-290 1001.5 680 82.9
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 3.4e-289 998.0 665 81.8
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 7.7e-289 996.9 685 81.9
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 1.3e-288 996.1 687 80.2
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 3.8e-288 994.6 686 79.4
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 3.8e-288 994.6 685 79.4
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 1.1e-287 993.0 663 81.3
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 3.2e-287 991.5 686 79.2
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 5.5e-287 990.7 692 78.9
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 5.5e-287 990.7 668 80.7
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 9.4e-287 989.9 663 81.3
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 1.2e-286 989.6 692 80.2
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 1.2e-286 989.6 651 82.8
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 1.2e-286 989.6 686 80.8
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 1.6e-286 989.2 687 79.3
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 1.0e-285 986.5 693 80.1
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 1.4e-285 986.1 691 78.6
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 6.7e-285 983.8 680 81.5
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 1.5e-284 982.6 664 81.5
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 1.5e-284 982.6 684 80.1
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 2.0e-284 982.2 685 80.3
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 2.6e-284 981.9 691 79.9
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 9.7e-284 979.9 729 77.9
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 1.4e-282 976.1 727 75.1
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 2.4e-282 975.3 683 80.8
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 3.1e-282 974.9 680 81.3
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 4.1e-282 974.5 692 79.8
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 7.0e-282 973.8 692 79.8
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 9.1e-282 973.4 686 78.0
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 2.6e-281 971.8 688 78.2
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 4.5e-281 971.1 689 80.6
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 7.7e-281 970.3 727 74.7
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 1.7e-280 969.1 691 80.2
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 2.2e-280 968.8 660 81.5
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 2.9e-280 968.4 688 79.8
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 5.0e-280 967.6 690 79.3
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 1.9e-279 965.7 691 77.4
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 1.9e-279 965.7 678 78.2
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 5.5e-279 964.1 689 80.3
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 5.5e-279 964.1 691 77.3
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 2.1e-278 962.2 698 77.9
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 1.3e-275 953.0 722 76.7
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 5.3e-274 947.6 690 78.6
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 5.3e-274 947.6 690 78.6
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 2.2e-272 942.2 692 81.2
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 5.0e-272 941.0 684 76.8
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 1.7e-267 926.0 688 76.3
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 1.8e-266 922.5 694 77.1
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 2.4e-266 922.2 655 79.4
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 1.6e-262 909.4 677 74.7
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 4.7e-262 907.9 676 75.1
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 1.4e-261 906.4 682 74.3
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 2.3e-261 905.6 1034 55.2
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 8.8e-261 903.7 685 74.2
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 2.4e-258 895.6 683 75.3
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.2e-257 893.3 733 70.4
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 5.0e-256 887.9 679 73.8
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 8.6e-256 887.1 637 78.3
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 4.2e-255 884.8 573 85.5
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 5.5e-255 884.4 669 75.3
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 9.8e-252 873.6 670 74.5
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 1.8e-250 869.4 675 74.2
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 2.4e-250 869.0 672 74.0
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.3e-248 863.2 719 69.5
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 2.5e-247 859.0 652 74.5
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 2.3e-245 852.4 670 71.6
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 8.9e-245 850.5 622 77.8
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 2.6e-244 849.0 719 69.3
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.6e-241 839.7 740 66.9
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 7.5e-236 820.8 665 69.3
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 3.2e-234 815.5 671 68.9
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 4.1e-234 815.1 667 69.1
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 9.2e-234 813.9 681 68.1
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 2.8e-214 749.2 713 65.4
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 1.4e-213 746.9 648 66.2
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 1.9e-207 726.5 551 75.5
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 9.0e-205 717.6 653 62.5
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.2e-204 717.2 650 62.8
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 2.8e-198 696.0 651 61.6
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 3.6e-161 572.8 696 50.6
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 2.8e-158 563.1 424 77.8
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 6.3e-150 535.4 401 76.3
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 4.5e-148 529.3 363 78.0
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 4.3e-130 469.5 332 73.2
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 4.1e-125 453.0 567 49.9
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 2.3e-107 394.0 370 66.8
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 5.3e-88 329.7 501 47.5
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 2.7e-84 317.4 510 46.5
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 5.8e-79 299.7 273 65.9
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 4.6e-76 290.0 708 31.8
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.9e-61 241.5 560 37.1
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 3.9e-51 207.2 185 64.9
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 1.1e-50 205.7 153 75.8
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 5.0e-46 190.3 152 69.7
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 4.2e-45 187.2 774 29.7
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 1.2e-44 185.7 125 79.2
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 5.9e-39 166.8 94 89.4
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 6.5e-30 136.7 604 29.1
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 3.2e-29 134.4 93 82.8
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 1.8e-19 102.1 71 77.5
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 2.3e-19 101.7 660 21.4
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 3.5e-15 87.8 109 56.0
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 3.5e-15 87.8 686 22.6
BolC8t50465H Brassica oleracea HOM05D004837 ORTHO05D005741 1.5e-13 82.4 82 64.6
Psat7g009760 Pisum sativum HOM05D004837 ORTHO05D005741 3.1e-11 74.7 43 76.7
C08p28590 Brassica napus HOM05D004837 ORTHO05D005741 9.8e-10 69.7 82 59.8
Actinidia31022 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.4e-08 65.9 199 35.7
DCAR_013034 Daucus carota HOM05D004837 ORTHO05D005741 9.2e-08 63.2 54 66.7


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