Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 2.8e-128 461.8 219 100.0
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.0e-64 250.8 230 59.6
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 9.7e-44 181.0 237 43.5
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 2.5e-39 166.4 240 44.6
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.1e-34 151.0 230 40.0
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.2e-33 147.5 232 40.1
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 5.0e-32 142.1 223 39.5
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.9e-31 140.2 243 36.2
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.0e-29 132.9 235 36.2
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 8.8e-29 131.3 235 34.9
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.5e-28 130.6 231 35.1
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 2.0e-28 130.2 234 37.6
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 3.3e-28 129.4 231 35.5
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 3.3e-28 129.4 244 36.5
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 4.4e-28 129.0 233 34.3
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.3e-27 127.5 231 33.8
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.3e-27 127.5 188 37.2
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 2.2e-27 126.7 239 36.0
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.8e-27 125.6 111 54.1
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.1e-26 124.4 188 38.8
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 4.1e-26 122.5 227 38.8
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.1e-26 122.5 111 53.2
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.1e-26 122.5 111 53.2
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-25 120.6 111 52.3
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 1.6e-25 120.6 236 36.0
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 2.7e-25 119.8 241 36.9
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 4.5e-25 119.0 243 34.6
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 5.9e-25 118.6 227 33.9
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.7e-24 117.1 114 55.3
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.2e-24 116.7 113 50.4
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 3.8e-24 115.9 231 35.5
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 6.5e-24 115.2 235 34.5
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 8.5e-24 114.8 232 34.9
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.9e-23 113.6 100 55.0
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.9e-23 113.6 236 33.1
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 7.2e-23 111.7 113 49.6
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.6e-22 110.5 227 31.7
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.6e-22 110.5 122 47.5
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 3.6e-22 109.4 234 37.2
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 4.7e-22 109.0 236 31.8
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 1.8e-21 107.1 242 34.3
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 2.3e-21 106.7 235 34.5
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 2.3e-21 106.7 251 32.7
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 4.0e-21 105.9 113 45.1
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 6.8e-21 105.1 113 46.9
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 6.8e-21 105.1 111 45.9
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 6.8e-21 105.1 110 49.1
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 8.8e-21 104.8 244 35.7
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.5e-20 104.0 114 50.9
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.0e-20 103.6 111 46.8
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.4e-20 102.8 115 46.1
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 4.4e-20 102.4 225 31.6
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 7.5e-20 101.7 114 46.5
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.2e-19 100.1 234 34.6
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 2.8e-19 99.8 230 33.9
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 5.4e-18 95.5 226 32.7
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 9.1e-18 94.7 200 32.0
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 2.0e-17 93.6 113 48.7
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.0e-17 93.6 233 31.8
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 2.0e-17 93.6 177 36.2
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 2.7e-17 93.2 235 31.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 3.5e-17 92.8 113 46.0
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 3.5e-17 92.8 110 40.9
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 3.5e-17 92.8 109 46.8
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.7e-17 91.7 115 43.5
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.9e-16 89.7 110 46.4
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.8e-16 89.4 104 44.2
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 3.8e-16 89.4 105 43.8
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 3.8e-16 89.4 235 30.2
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 5.0e-16 89.0 105 42.9
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.0e-16 89.0 105 43.8
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 6.5e-16 88.6 106 45.3
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.5e-15 87.4 99 44.4
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 4.2e-15 85.9 109 42.2
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 5.5e-15 85.5 109 42.2
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 5.5e-15 85.5 109 42.2
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 5.5e-15 85.5 237 30.4
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 7.2e-15 85.1 113 45.1
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 1.2e-14 84.3 115 41.7
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.6e-14 84.0 109 40.4
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 3.6e-14 82.8 111 38.7
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.4e-13 80.9 109 37.6
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.8e-13 80.5 112 41.1
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.3e-13 80.1 107 41.1
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 5.2e-13 79.0 190 33.2
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.2e-12 77.8 126 38.9
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 2.6e-12 76.6 113 35.4
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 3.4e-12 76.3 115 39.1
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 5.7e-12 75.5 114 39.5
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 9.8e-12 74.7 99 41.4
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 2.8e-11 73.2 197 26.4
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 3.7e-11 72.8 115 36.5
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 4.9e-11 72.4 99 40.4
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 1.1e-10 71.2 132 39.4
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 1.4e-10 70.9 113 40.7
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 3.1e-10 69.7 107 39.3
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 1.7e-08 63.9 41 61.0
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.9e-08 63.2 88 42.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 5.6e-07 58.9 112 38.4
CDE06G0796 Ceratophyllum demersum HOM05D006585 ORTHO05D007798 9.5e-07 58.2 212 28.3
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 6.1e-06 55.5 259 26.6


User provided reference genes

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