Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.2e-196 688.7 339 100.0
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.5e-173 611.3 339 86.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.3e-172 609.8 340 87.6
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.7e-172 609.4 339 87.0
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.8e-172 608.2 339 86.1
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 8.5e-172 607.1 347 86.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.5e-171 605.5 339 86.4
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.7e-170 601.3 336 86.0
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.0e-169 600.1 339 85.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 4.2e-147 525.0 336 76.8
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.6e-146 521.9 340 76.2
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 6.1e-146 521.2 340 75.3
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.8e-145 517.3 336 76.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.3e-143 511.1 339 74.9
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 6.3e-143 511.1 317 78.9
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.8e-142 509.6 341 74.5
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.6e-141 506.5 340 73.2
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.6e-141 506.5 303 80.5
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.0e-140 503.8 338 73.7
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.9e-140 502.3 390 66.9
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 5.0e-140 501.5 337 73.6
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 2.8e-138 495.7 339 72.3
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 3.6e-138 495.4 312 76.6
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.7e-138 495.0 338 73.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.2e-136 490.3 312 77.6
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.5e-136 490.0 320 74.7
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 4.4e-136 488.4 338 71.9
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.4e-136 488.4 337 72.1
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.2e-135 486.1 337 74.2
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 4.1e-134 481.9 317 76.0
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 4.1e-134 481.9 337 71.2
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.0e-133 479.6 287 77.7
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.5e-133 478.8 340 70.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 5.9e-133 478.0 317 75.4
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 5.9e-133 478.0 282 82.3
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 5.9e-133 478.0 285 79.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 7.8e-133 477.6 285 76.5
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.0e-132 477.2 289 77.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.0e-132 477.2 339 70.5
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.0e-132 477.2 283 79.2
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 8.6e-132 474.2 283 80.9
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.3e-131 472.2 342 69.3
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 4.3e-131 471.9 338 69.8
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 4.3e-131 471.9 345 70.4
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.6e-130 469.9 338 70.7
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.1e-130 469.5 385 64.2
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.6e-130 468.8 337 67.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-129 465.7 337 67.4
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 3.0e-129 465.7 335 71.0
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.0e-129 465.7 283 78.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 4.0e-129 465.3 311 74.0
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 9.8e-128 460.7 347 68.0
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.3e-127 460.3 338 66.6
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.7e-127 459.9 341 67.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.7e-127 459.9 340 68.8
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.7e-127 459.9 319 69.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.7e-127 459.9 283 76.3
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 2.9e-127 459.1 338 66.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 3.7e-127 458.8 338 66.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 4.9e-127 458.4 340 67.6
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.4e-126 456.8 412 61.7
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.4e-126 456.1 312 70.5
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.2e-126 455.7 312 70.5
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 4.1e-126 455.3 284 75.7
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 4.1e-126 455.3 284 76.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 4.1e-126 455.3 293 74.4
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.1e-126 455.3 306 72.2
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 4.1e-126 455.3 338 67.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 9.2e-126 454.1 341 66.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.2e-125 453.8 348 65.2
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.6e-125 453.4 282 77.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.7e-125 452.6 310 72.3
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 7.8e-125 451.1 307 72.0
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.3e-124 449.5 312 71.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.5e-123 446.0 285 75.8
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.6e-123 444.9 286 72.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.4e-121 440.3 261 78.9
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.3e-121 439.5 285 75.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.3e-121 439.5 281 74.4
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 3.1e-121 439.1 264 78.4
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 3.1e-121 439.1 363 61.7
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.0e-121 438.7 296 72.6
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.3e-119 433.7 306 68.3
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 9.5e-115 417.5 430 53.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.2e-114 417.2 314 67.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.2e-114 417.2 279 73.5
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 4.7e-114 415.2 266 72.9
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.1e-113 414.1 291 68.4
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 6.0e-109 398.3 337 62.0
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 7.8e-109 397.9 274 69.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.9e-108 395.6 318 64.5
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.6e-106 390.2 284 66.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.1e-101 373.2 316 63.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 9.9e-96 354.4 287 57.5
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.4e-94 348.6 258 61.2
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 4.6e-93 345.5 321 58.6
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.0e-92 344.4 275 63.3
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 7.3e-91 338.2 282 63.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.4e-86 323.9 268 57.1
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 3.2e-86 322.8 292 57.9
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.3e-84 317.4 253 58.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.7e-71 273.9 157 76.4
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.7e-69 266.5 147 83.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 7.4e-67 258.5 166 71.7
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.9e-62 243.8 134 85.1
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.6e-61 239.6 134 83.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 5.7e-59 232.3 135 79.3
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.5e-56 224.2 272 44.1
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.7e-53 213.4 287 44.6
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.1e-46 191.4 136 62.5
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.0e-41 172.2 112 76.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 3.1e-33 146.7 313 31.0
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.5e-30 137.9 285 32.6
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.9e-30 137.5 288 34.0
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.7e-16 90.5 99 46.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.5e-16 89.7 59 66.1
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.2e-12 76.3 52 63.5
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.4e-09 68.2 86 47.7


User provided reference genes

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