Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 5.4e-44 180.6 93 100.0
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-34 149.8 94 85.1
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 5.0e-34 147.5 94 85.1
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 5.0e-34 147.5 94 85.1
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.1e-27 125.6 92 76.1
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-26 123.2 92 75.0
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.7e-26 122.5 92 75.0
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.7e-21 105.9 93 67.7
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 3.9e-18 94.7 93 62.4
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 7.3e-17 90.5 93 59.1
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 9.6e-17 90.1 93 59.1
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 4.7e-16 87.8 95 57.9
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 8.1e-16 87.0 93 57.0
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.2e-14 83.2 88 60.2
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 2.0e-14 82.4 93 54.8
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 4.4e-14 81.3 95 53.7
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 2.2e-13 79.0 93 54.8
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 4.9e-13 77.8 92 55.4
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 1.9e-12 75.9 86 52.3
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.2e-12 74.7 115 47.0
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 5.4e-12 74.3 88 52.3
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 5.4e-12 74.3 89 52.8
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 7.1e-12 73.9 97 54.6
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 3.5e-11 71.6 98 50.0
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 6.0e-11 70.9 93 51.6
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.7e-10 69.3 93 53.8
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 1.7e-10 69.3 90 52.2
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 3.9e-10 68.2 94 53.2
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 3.9e-10 68.2 90 51.1
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 5.1e-10 67.8 93 52.7
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 6.6e-10 67.4 57 66.7
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 1.5e-09 66.2 93 49.5
Potri.008G120050 Populus trichocarpa HOM05D008456 ORTHO05D010229 2.5e-09 65.5 99 48.5
Sabra10G0095500 Salix brachista HOM05D008456 ORTHO05D010229 2.5e-09 65.5 99 46.5
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 2.5e-09 65.5 95 48.4
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 2.5e-09 65.5 86 50.0
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 3.3e-09 65.1 90 52.2
Sabra08G0091200 Salix brachista HOM05D008456 ORTHO05D010229 3.3e-09 65.1 95 51.6
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 5.6e-09 64.3 97 50.5
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 5.6e-09 64.3 96 50.0
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 5.6e-09 64.3 97 48.5
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 3.6e-08 61.6 63 50.8
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 6.2e-08 60.8 90 50.0
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.1e-07 60.1 93 49.5
Sabra16G0187600 Salix brachista HOM05D008456 ORTHO05D010229 6.9e-07 57.4 100 47.0
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 4.4e-06 54.7 79 46.8
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 7.6e-06 53.9 120 38.3
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 7.6e-06 53.9 53 58.5


User provided reference genes

Program Settings