Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.7e-287 991.9 483 100.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 7.2e-225 783.9 481 80.7
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.3e-221 773.1 481 79.6
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 7.7e-219 763.8 481 78.8
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 7.0e-188 661.0 484 67.6
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.1e-183 645.6 479 66.4
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.4e-182 642.1 488 67.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 6.4e-181 637.9 486 66.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 1.9e-180 636.3 480 65.2
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.2e-180 635.6 492 66.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 5.4e-180 634.8 486 66.5
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.7e-179 632.5 482 65.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.5e-179 632.1 485 65.8
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 7.3e-177 624.4 443 68.4
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.4e-174 615.1 480 63.5
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.7e-173 613.2 492 65.7
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.2e-171 607.1 482 64.5
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 4.6e-171 605.1 478 63.8
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.8e-171 604.4 484 64.3
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 5.6e-169 598.2 487 61.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.6e-168 596.7 484 63.2
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-168 596.7 483 63.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 4.0e-167 592.0 460 64.1
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.2e-166 590.5 474 61.2
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 4.9e-165 585.1 427 65.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 2.7e-163 579.3 498 58.4
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 7.8e-163 577.8 479 61.0
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 7.8e-163 577.8 484 61.2
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.7e-162 576.6 475 60.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 5.6e-161 571.6 487 61.8
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-159 567.4 479 61.6
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 9.0e-159 564.3 490 57.3
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.5e-158 562.0 494 58.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 4.5e-158 562.0 494 58.5
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.9e-157 559.3 478 59.0
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 4.9e-157 558.5 470 59.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-156 557.4 497 56.9
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 5.4e-156 555.1 492 57.3
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 7.1e-156 554.7 497 56.5
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 9.3e-156 554.3 489 59.5
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.7e-155 552.7 477 58.7
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 4.6e-155 552.0 488 57.8
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.8e-154 550.1 401 66.3
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.9e-154 548.9 450 58.9
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 5.1e-154 548.5 482 57.1
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.5e-153 547.0 489 56.0
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.9e-153 546.6 474 57.0
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 5.6e-153 545.0 477 60.0
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 9.6e-153 544.3 463 58.1
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 4.8e-152 542.0 487 56.5
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 4.8e-152 542.0 432 61.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 2.4e-151 539.7 455 60.2
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 2.4e-151 539.7 437 61.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.5e-150 537.0 390 65.9
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.0e-150 536.6 469 59.1
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 7.6e-150 534.6 442 61.1
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.3e-149 533.9 482 57.5
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.3e-149 533.9 424 60.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.8e-149 532.3 371 65.8
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.8e-149 532.3 496 57.7
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 4.9e-149 531.9 475 58.1
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.9e-148 530.0 439 62.0
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 2.5e-148 529.6 455 57.6
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 4.2e-148 528.9 457 59.5
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 4.2e-148 528.9 457 59.5
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 4.2e-148 528.9 457 59.5
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.2e-148 528.9 493 54.6
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 4.2e-148 528.9 475 57.3
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.2e-147 527.3 399 63.9
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.5e-147 525.8 455 58.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 3.5e-147 525.8 364 67.3
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 4.3e-145 518.8 443 58.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 7.4e-145 518.1 496 52.6
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.3e-144 517.3 456 55.9
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.8e-143 513.5 477 56.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 3.1e-143 512.7 486 55.3
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.0e-143 512.3 481 55.7
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.0e-143 511.1 481 55.7
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.0e-142 510.0 480 54.8
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.5e-142 508.8 481 55.5
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.2e-141 506.5 426 57.5
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 8.4e-141 504.6 431 58.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.4e-140 503.8 445 58.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 7.1e-140 501.5 452 58.8
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 9.3e-140 501.1 435 59.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.6e-139 500.4 493 53.5
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 4.6e-139 498.8 435 58.9
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 6.0e-139 498.4 450 57.3
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.5e-137 493.8 458 57.2
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 9.7e-137 491.1 453 57.2
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.8e-136 489.6 430 56.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.1e-135 487.6 476 56.1
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.1e-135 485.7 481 53.2
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.6e-134 483.0 494 53.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.0e-129 466.8 415 57.1
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.1e-127 459.5 452 53.8
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.2e-123 447.6 384 54.4
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.7e-121 438.7 492 47.6
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.0e-111 405.2 476 49.4
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.1e-107 393.7 421 46.6
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 3.1e-95 353.2 325 58.5
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.0e-85 321.6 492 42.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.2e-81 308.1 280 57.9
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.2e-79 300.1 258 57.0
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.2e-78 298.1 390 42.3
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 6.0e-78 295.8 207 62.3
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.0e-77 295.0 380 43.7
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 2.9e-72 276.9 220 67.7
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.2e-70 271.6 394 39.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.1e-58 231.9 395 36.7
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 7.1e-55 219.2 310 39.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 5.8e-33 146.4 183 46.4
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.2e-31 140.6 385 29.9
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.2e-30 138.7 129 54.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-30 138.3 111 58.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.1e-29 133.3 410 30.2
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 5.0e-24 116.7 414 28.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.5e-24 116.3 335 31.9
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.9e-23 114.8 341 28.4
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 7.9e-22 109.4 57 82.5
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.3e-19 102.1 230 35.2


User provided reference genes

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