Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 4.7e-155 551.2 286 100.0
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 5.5e-132 474.6 288 87.2
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.6e-131 473.0 292 84.6
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.0e-130 470.3 292 85.3
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.7e-126 455.7 285 82.8
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.0e-114 417.2 286 77.3
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.0e-105 386.3 292 71.2
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.6e-105 386.0 288 72.6
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.8e-105 384.8 287 71.1
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 5.8e-105 384.8 297 71.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.7e-104 383.3 295 68.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.2e-104 382.9 295 68.8
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.7e-104 382.1 294 70.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 6.4e-104 381.3 296 70.3
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 8.3e-104 380.9 288 69.1
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.4e-103 380.2 307 68.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 3.2e-103 379.0 292 71.2
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 9.2e-103 377.5 318 69.2
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.5e-102 375.6 284 74.6
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.9e-101 372.1 295 69.2
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.9e-100 369.8 289 70.2
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.6e-100 368.2 287 66.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 7.3e-100 367.9 287 72.1
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.5e-100 367.5 295 69.5
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 9.5e-100 367.5 284 71.5
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.1e-99 366.3 286 67.8
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.1e-99 366.3 287 71.8
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.6e-99 365.5 287 71.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 8.1e-99 364.4 287 70.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 1.1e-98 364.0 289 67.5
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.4e-98 363.6 286 70.3
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.3e-98 362.8 288 69.1
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 4.0e-98 362.1 287 68.6
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 4.0e-98 362.1 286 67.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 6.8e-98 361.3 287 67.6
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 8.9e-98 360.9 292 68.2
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 2.0e-97 359.8 287 68.3
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.6e-97 359.4 286 68.2
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.6e-97 359.4 289 69.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 3.4e-97 359.0 287 68.3
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.3e-96 357.1 289 69.6
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 4.9e-96 355.1 287 69.7
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 6.4e-96 354.8 288 70.8
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.1e-95 354.0 286 65.0
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.4e-95 353.6 291 66.7
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.4e-95 352.8 286 66.1
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.2e-95 352.4 281 69.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.4e-95 351.7 289 65.1
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.7e-94 349.4 294 68.0
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.5e-94 349.0 286 66.8
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.0e-93 347.4 297 68.7
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.3e-93 346.3 325 60.6
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.9e-92 343.2 287 66.2
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.6e-91 340.1 286 65.4
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.6e-91 340.1 284 65.8
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.8e-91 339.3 367 56.7
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.4e-90 336.3 280 66.8
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 4.0e-90 335.5 281 64.8
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 5.2e-90 335.1 286 65.0
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 6.8e-90 334.7 416 50.7
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 8.9e-90 334.3 204 80.9
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.2e-89 334.0 302 61.9
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.2e-89 334.0 280 65.0
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 4.4e-89 332.0 286 66.4
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 9.9e-89 330.9 313 62.0
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 8.4e-88 327.8 287 62.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 1.4e-87 327.0 288 66.7
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.2e-87 325.9 287 61.0
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 3.2e-87 325.9 288 60.8
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 5.4e-87 325.1 294 65.6
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 5.4e-87 325.1 286 65.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 5.1e-85 318.5 289 63.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.1e-84 317.4 283 62.9
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 5.6e-84 315.1 243 67.9
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 7.3e-84 314.7 346 53.5
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.3e-83 313.9 289 64.0
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.1e-83 313.2 223 72.2
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 6.2e-83 311.6 296 63.9
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.8e-82 310.1 281 62.3
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 4.0e-82 308.9 287 63.1
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.4e-81 305.8 311 58.2
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 7.1e-79 298.1 300 58.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 9.3e-79 297.7 326 52.8
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 9.3e-79 297.7 199 74.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 2.1e-78 296.6 198 74.2
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 3.0e-77 292.7 284 56.3
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 5.6e-76 288.5 324 54.6
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 5.6e-76 288.5 195 72.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.3e-75 287.3 286 55.6
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.8e-75 285.4 284 58.8
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.4e-74 283.1 284 56.7
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.1e-74 282.7 197 71.1
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.1e-66 257.7 261 58.6
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.1e-66 256.1 154 79.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.1e-66 256.1 244 58.6
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 2.6e-65 253.1 330 50.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 3.2e-63 246.1 228 57.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.8e-58 230.3 161 73.9
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 9.0e-58 228.0 131 88.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.2e-56 223.4 190 63.7
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.8e-53 213.8 209 62.7
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.1e-52 211.1 133 81.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 9.4e-47 191.4 405 39.3
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.7e-46 189.9 247 45.7
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 6.1e-46 188.7 211 52.6
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.0e-45 186.4 183 60.1
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.5e-41 174.1 98 84.7
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.7e-32 144.1 137 59.9
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 6.7e-29 132.1 80 75.0
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.8e-27 126.7 226 41.6
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.8e-26 124.0 96 65.6
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.2e-24 117.1 75 77.3
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.9e-23 114.0 292 34.6
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-20 104.4 83 65.1
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 2.0e-12 77.4 217 28.6
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.7e-11 73.2 61 60.7
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 4.5e-09 66.2 74 52.7
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 7.3e-07 58.9 38 73.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.1e-06 57.4 37 70.3
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 4.7e-06 56.2 34 79.4
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 8.0e-06 55.5 37 70.3


User provided reference genes

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