Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G337800 Theobroma cacao HOM05D002362 ORTHO05D002465 1.1e-65 253.1 119 100.0
Thecc.02G337300 Theobroma cacao HOM05D002362 ORTHO05D002465 3.5e-48 194.9 109 87.2
Duzib251G0312 Durio zibethinus HOM05D002362 ORTHO05D002465 3.3e-38 161.8 110 75.5
COL.COLO4_27946 Corchorus olitorius HOM05D002362 ORTHO05D002465 1.2e-35 153.3 111 71.2
Gohir.D13G079100 Gossypium hirsutum HOM05D002362 ORTHO05D002465 6.2e-29 131.0 109 65.1
Gorai.013G090500 Gossypium raimondii HOM05D002362 ORTHO05D002465 5.8e-27 124.4 109 64.2
Gohir.A13G079400 Gossypium hirsutum HOM05D002362 ORTHO05D002465 8.4e-26 120.6 109 63.3
Gohir.D05G305800 Gossypium hirsutum HOM05D002362 ORTHO05D002465 1.9e-25 119.4 111 60.4
Gohir.A05G305700 Gossypium hirsutum HOM05D002362 ORTHO05D002465 4.2e-25 118.2 110 60.0
Gorai.009G325800 Gossypium raimondii HOM05D002362 ORTHO05D002465 7.2e-25 117.5 110 60.0
TWI79G0512 Tripterygium wilfordii HOM05D002362 ORTHO05D002465 4.3e-14 81.6 109 45.0
Cpa.g.sc1264.1 Carica papaya HOM05D002362 ORTHO05D002465 1.3e-13 80.1 109 45.9
Haze_11943 Corylus avellana HOM05D002362 ORTHO05D002465 3.1e-12 75.5 110 44.5
Potri.008G092400 Populus trichocarpa HOM05D002362 ORTHO05D002465 1.3e-10 70.1 107 43.0
QL03p070031 Quercus lobata HOM05D002362 ORTHO05D002465 1.7e-10 69.7 114 48.2
Sabra08G0069200 Salix brachista HOM05D002362 ORTHO05D002465 3.8e-10 68.6 107 41.1
Atru.chr11.1701 Acer truncatum HOM05D002362 ORTHO05D002465 5.0e-10 68.2 110 42.7
MD16G1065900 Malus domestica HOM05D002362 ORTHO05D002465 5.0e-10 68.2 110 46.4
AL2G28490 Arabidopsis lyrata HOM05D002362 ORTHO05D002465 1.9e-09 66.2 107 43.9
Prupe.1G281200 Prunus persica HOM05D002362 ORTHO05D002465 4.2e-09 65.1 109 42.2
A02p15860 Brassica napus HOM05D002362 ORTHO05D002465 5.5e-09 64.7 112 39.3
MD13G1066700 Malus domestica HOM05D002362 ORTHO05D002465 5.5e-09 64.7 109 39.4
RcHm_v2.0_Chr4g0438971 Rosa chinensis HOM05D002362 ORTHO05D002465 7.2e-09 64.3 110 41.8
GSVIVG01010097001 Vitis vinifera HOM05D002362 ORTHO05D002465 1.2e-08 63.5 110 39.1
BolC2t08704H Brassica oleracea HOM05D002362 ORTHO05D002465 1.6e-08 63.2 109 39.4
THA.LOC104822025 Tarenaya hassleriana HOM05D002362 ORTHO05D002465 1.6e-08 63.2 109 41.3
BcaB03g15898 Brassica carinata HOM05D002362 ORTHO05D002465 2.1e-08 62.8 113 41.6
BcaB05g24445 Brassica carinata HOM05D002362 ORTHO05D002465 2.1e-08 62.8 113 41.6
BcaC03g15078 Brassica carinata HOM05D002362 ORTHO05D002465 2.7e-08 62.4 109 40.4
Carub.0002s1598 Capsella rubella HOM05D002362 ORTHO05D002465 2.7e-08 62.4 110 40.9
Manes.01G031200 Manihot esculenta HOM05D002362 ORTHO05D002465 2.7e-08 62.4 113 39.8
AT1G69380 Arabidopsis thaliana HOM05D002362 ORTHO05D002465 4.7e-08 61.6 110 40.0
Aa31LG4G11480 Aethionema arabicum HOM05D002362 ORTHO05D002465 1.0e-07 60.5 109 42.2
CARHR062260 Cardamine hirsuta HOM05D002362 ORTHO05D002465 1.0e-07 60.5 111 38.7
Thhalv10018736m.g Eutrema salsugineum HOM05D002362 ORTHO05D002465 1.0e-07 60.5 109 38.5
BcaB03g15899 Brassica carinata HOM05D002362 ORTHO05D002465 1.4e-07 60.1 109 39.4
C06p40540 Brassica napus HOM05D002362 ORTHO05D002465 1.4e-07 60.1 109 39.4
BolC6t39377H Brassica oleracea HOM05D002362 ORTHO05D002465 1.4e-07 60.1 109 39.4
C02p26320 Brassica napus HOM05D002362 ORTHO05D002465 1.8e-07 59.7 109 38.5
Dinv16697 Davidia involucrata HOM05D002362 ORTHO05D002465 2.3e-07 59.3 110 36.4
A07p35680 Brassica napus HOM05D002362 ORTHO05D002465 3.0e-07 58.9 109 40.4
BraA07t31156Z Brassica rapa HOM05D002362 ORTHO05D002465 3.0e-07 58.9 109 40.4
Sp5g24430 Schrenkiella parvula HOM05D002362 ORTHO05D002465 3.9e-07 58.5 109 40.4
Hma1.2p1_0354F.1_g133680 Hydrangea macrophylla HOM05D002362 ORTHO05D002465 1.1e-06 57.0 113 36.3
PGR102G1537 Punica granatum HOM05D002362 ORTHO05D002465 1.1e-06 57.0 109 42.2
Sabra10G0123700 Salix brachista HOM05D002362 ORTHO05D002465 4.4e-06 55.1 113 38.1
Sc11g0002220 Simmondsia chinensis HOM05D002362 ORTHO05D002465 5.7e-06 54.7 109 36.7
vmacro16358 Vaccinium macrocarpon HOM05D002362 ORTHO05D002465 5.7e-06 54.7 119 37.8


User provided reference genes

Program Settings