Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G337600 Theobroma cacao HOM05D004550 ORTHO05D005340 4.1e-66 254.6 129 100.0
Thecc.02G338200 Theobroma cacao HOM05D004550 ORTHO05D005340 1.6e-49 199.5 110 93.6
Duzib251G0963 Durio zibethinus HOM05D004550 ORTHO05D005340 6.5e-48 194.1 110 90.0
Gohir.A12G162200 Gossypium hirsutum HOM05D004550 ORTHO05D005340 3.2e-47 191.8 110 89.1
Gohir.D12G165500 Gossypium hirsutum HOM05D004550 ORTHO05D005340 3.2e-47 191.8 110 89.1
Gorai.008G178200 Gossypium raimondii HOM05D004550 ORTHO05D005340 3.2e-47 191.8 110 89.1
COL.COLO4_27949 Corchorus olitorius HOM05D004550 ORTHO05D005340 8.0e-46 187.2 108 89.8
Duzib268G1083 Durio zibethinus HOM05D004550 ORTHO05D005340 3.0e-45 185.3 109 86.2
FvH4_4g30590 Fragaria vesca HOM05D004550 ORTHO05D005340 1.2e-44 183.3 110 80.9
FAN12G3802 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.2e-44 183.3 110 80.9
FAN17G0531 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.2e-44 183.3 110 80.9
RcHm_v2.0_Chr4g0438981 Rosa chinensis HOM05D004550 ORTHO05D005340 1.5e-44 183.0 110 80.9
FAN07G0354 Fragaria x ananassa HOM05D004550 ORTHO05D005340 2.6e-44 182.2 110 80.0
Atru.chr11.1702 Acer truncatum HOM05D004550 ORTHO05D005340 5.7e-44 181.0 109 81.7
Ciclev10032704m.g Citrus clementina HOM05D004550 ORTHO05D005340 5.7e-44 181.0 109 82.6
Dinv34106 Davidia involucrata HOM05D004550 ORTHO05D005340 6.3e-43 177.6 109 81.7
FAN22G1576 Fragaria x ananassa HOM05D004550 ORTHO05D005340 6.3e-43 177.6 110 78.2
vmacro01339 Vaccinium macrocarpon HOM05D004550 ORTHO05D005340 8.2e-43 177.2 109 79.8
QL03p070023 Quercus lobata HOM05D004550 ORTHO05D005340 3.1e-42 175.3 109 79.8
SGA_v2.0_scaffold16G07747 Striga asiatica HOM05D004550 ORTHO05D005340 9.1e-42 173.7 108 79.6
A02p15870 Brassica napus HOM05D004550 ORTHO05D005340 2.7e-41 172.2 109 78.9
BolC2t08705H Brassica oleracea HOM05D004550 ORTHO05D005340 2.7e-41 172.2 109 78.9
Rhsim12G0077600 Rhododendron simsii HOM05D004550 ORTHO05D005340 2.7e-41 172.2 109 77.1
CiPaw.06G089400 Carya illinoinensis HOM05D004550 ORTHO05D005340 3.5e-41 171.8 109 78.9
BcaB05g24446 Brassica carinata HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 78.0
A07p35690 Brassica napus HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 78.9
C06p40530 Brassica napus HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 78.9
BolC6t39378H Brassica oleracea HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 78.9
BraA07t31157Z Brassica rapa HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 78.9
Migut.L01230 Erythranthe guttata HOM05D004550 ORTHO05D005340 4.5e-41 171.4 109 76.1
Oeu021093.1 Olea europaea HOM05D004550 ORTHO05D005340 4.5e-41 171.4 108 77.8
C02p26330 Brassica napus HOM05D004550 ORTHO05D005340 5.9e-41 171.0 109 78.0
SGA_v2.0_scaffold36G14423 Striga asiatica HOM05D004550 ORTHO05D005340 7.7e-41 170.6 110 80.0
TWI31G0520 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 7.7e-41 170.6 109 78.9
unitig_21.g20859 Utricularia gibba HOM05D004550 ORTHO05D005340 7.7e-41 170.6 109 76.1
Cpa.g.sc1.80 Carica papaya HOM05D004550 ORTHO05D005340 1.0e-40 170.2 109 77.1
Sp5g24440 Schrenkiella parvula HOM05D004550 ORTHO05D005340 1.0e-40 170.2 109 77.1
MSTRG.7770 Avicennia marina HOM05D004550 ORTHO05D005340 1.3e-40 169.9 109 76.1
Cfa008917 Carpinus fangiana HOM05D004550 ORTHO05D005340 1.7e-40 169.5 109 78.0
Actinidia31956 Actinidia chinensis HOM05D004550 ORTHO05D005340 2.2e-40 169.1 109 78.0
BcaC03g15080 Brassica carinata HOM05D004550 ORTHO05D005340 2.9e-40 168.7 109 78.0
Hma1.2p1_0354F.1_g133690 Hydrangea macrophylla HOM05D004550 ORTHO05D005340 3.8e-40 168.3 109 76.1
CiPaw.05G128700 Carya illinoinensis HOM05D004550 ORTHO05D005340 5.0e-40 167.9 109 78.0
Cc11_g12470 Coffea canephora HOM05D004550 ORTHO05D005340 6.5e-40 167.5 108 78.7
Thhalv10019103m.g Eutrema salsugineum HOM05D004550 ORTHO05D005340 6.5e-40 167.5 109 74.3
Aa31LG4G11470 Aethionema arabicum HOM05D004550 ORTHO05D005340 8.5e-40 167.2 109 76.1
BcaB03g15897 Brassica carinata HOM05D004550 ORTHO05D005340 8.5e-40 167.2 108 76.9
DCAR_007179 Daucus carota HOM05D004550 ORTHO05D005340 8.5e-40 167.2 109 75.2
Haze_11945 Corylus avellana HOM05D004550 ORTHO05D005340 1.1e-39 166.8 108 75.9
TAR629G0577 Trochodendron aralioides HOM05D004550 ORTHO05D005340 1.1e-39 166.8 109 76.1
AL2G28500 Arabidopsis lyrata HOM05D004550 ORTHO05D005340 1.5e-39 166.4 109 75.2
CSS0021997 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 1.9e-39 166.0 108 75.9
CSS0045485 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 1.9e-39 166.0 108 75.9
CARHR062270 Cardamine hirsuta HOM05D004550 ORTHO05D005340 1.9e-39 166.0 109 74.3
MELO3C002974.2 Cucumis melo HOM05D004550 ORTHO05D005340 1.9e-39 166.0 107 79.4
CsaV3_5G025150 Cucumis sativus L. HOM05D004550 ORTHO05D005340 1.9e-39 166.0 107 79.4
DCAR_030983 Daucus carota HOM05D004550 ORTHO05D005340 2.5e-39 165.6 109 74.3
Eucgr.B03186 Eucalyptus grandis HOM05D004550 ORTHO05D005340 2.5e-39 165.6 109 76.1
TWI79G1514 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 2.5e-39 165.6 109 77.1
ClCG09G021950 Citrullus lanatus HOM05D004550 ORTHO05D005340 3.2e-39 165.2 107 78.5
PGR102G3210 Punica granatum HOM05D004550 ORTHO05D005340 3.2e-39 165.2 108 77.8
AT1G69390 Arabidopsis thaliana HOM05D004550 ORTHO05D005340 4.2e-39 164.9 109 74.3
MBI19_g03106_MAGBIO Magnolia biondii HOM05D004550 ORTHO05D005340 4.2e-39 164.9 110 77.3
Manes.05G107100 Manihot esculenta HOM05D004550 ORTHO05D005340 4.2e-39 164.9 109 73.4
Prupe.1G281100 Prunus persica HOM05D004550 ORTHO05D005340 4.2e-39 164.9 109 76.1
Nitab4.5_0000334g0090 Nicotiana tabacum HOM05D004550 ORTHO05D005340 5.5e-39 164.5 111 75.7
Nitab4.5_0011843g0010 Nicotiana tabacum HOM05D004550 ORTHO05D005340 5.5e-39 164.5 111 75.7
Potri.008G092300 Populus trichocarpa HOM05D004550 ORTHO05D005340 5.5e-39 164.5 108 73.1
Sabra08G0069100 Salix brachista HOM05D004550 ORTHO05D005340 5.5e-39 164.5 108 75.0
PSO063G5570 Papaver somniferum HOM05D004550 ORTHO05D005340 7.2e-39 164.1 109 74.3
TAR371G1135 Trochodendron aralioides HOM05D004550 ORTHO05D005340 7.2e-39 164.1 109 76.1
Aqoxy3G03523 Aquilegia oxysepala HOM05D004550 ORTHO05D005340 9.4e-39 163.7 109 77.1
Carub.0002s1599 Capsella rubella HOM05D004550 ORTHO05D005340 2.1e-38 162.5 109 71.6
Lalb_Chr17g0340931 Lupinus albus HOM05D004550 ORTHO05D005340 2.1e-38 162.5 110 73.6
Nn4g23307 Nelumbo nucifera HOM05D004550 ORTHO05D005340 2.1e-38 162.5 108 77.8
PSO063G6186 Papaver somniferum HOM05D004550 ORTHO05D005340 2.7e-38 162.2 109 73.4
Manes.05G087100 Manihot esculenta HOM05D004550 ORTHO05D005340 3.6e-38 161.8 109 73.4
TAR374G1091 Trochodendron aralioides HOM05D004550 ORTHO05D005340 4.7e-38 161.4 108 75.0
Peaxi162Scf00364g00223 Petunia axillaris HOM05D004550 ORTHO05D005340 6.1e-38 161.0 123 65.9
GSVIVG01001334001 Vitis vinifera HOM05D004550 ORTHO05D005340 6.1e-38 161.0 110 76.4
Potri.010G162600 Populus trichocarpa HOM05D004550 ORTHO05D005340 1.4e-37 159.8 108 72.2
Sabra10G0123800 Salix brachista HOM05D001252 ORTHO05D005340 1.4e-37 159.8 108 72.2
Sed0017620 Sechium edule HOM05D004550 ORTHO05D005340 1.4e-37 159.8 99 81.8
Actinidia19927 Actinidia chinensis HOM05D004550 ORTHO05D005340 2.3e-37 159.1 110 71.8
ECA233G5814 Erigeron canadensis HOM05D004550 ORTHO05D005340 2.3e-37 159.1 110 71.8
Ah.03g134600 Amaranthus hybridus HOM05D004550 ORTHO05D005340 3.0e-37 158.7 108 72.2
Ca_27938_v3 Cicer arietinum L. HOM05D004550 ORTHO05D005340 3.0e-37 158.7 104 76.0
THA.LOC104822027 Tarenaya hassleriana HOM05D004550 ORTHO05D005340 3.0e-37 158.7 110 73.6
VMungo1215G2831 Vigna mungo HOM05D004550 ORTHO05D005340 3.0e-37 158.7 110 71.8
HanXRQChr12g0362721 Helianthus annuus HOM05D004550 ORTHO05D005340 4.0e-37 158.3 110 70.9
arahy.Tifrunner.gnm1.ann1.M1L69X Arachis hypogaea HOM05D004550 ORTHO05D005340 5.2e-37 157.9 106 74.5
CANSAT64G2188 Cannabis sativa HOM05D004550 ORTHO05D005340 5.2e-37 157.9 105 75.2
Phvul.002G090800 Phaseolus vulgaris HOM05D004550 ORTHO05D005340 6.8e-37 157.5 110 70.9
Potri.004G121000 Populus trichocarpa HOM05D004550 ORTHO05D005340 6.8e-37 157.5 109 74.3
RcHm_v2.0_Chr2g0166971 Rosa chinensis HOM05D004550 ORTHO05D005340 6.8e-37 157.5 108 73.1
HanXRQChr08g0210541 Helianthus annuus HOM05D004550 ORTHO05D005340 1.2e-36 156.8 110 70.9
HanXRQChr08g0211031 Helianthus annuus HOM05D004550 ORTHO05D005340 1.2e-36 156.8 110 70.9
Lsat_1_v5_gn_8_46800 Lactuca sativa HOM05D004550 ORTHO05D005340 1.5e-36 156.4 110 70.9
arahy.Tifrunner.gnm1.ann1.F9ESEJ Arachis hypogaea HOM05D004550 ORTHO05D005340 2.0e-36 156.0 106 74.5
MD09G1057200 Malus domestica HOM05D004550 ORTHO05D005340 2.0e-36 156.0 109 72.5
Glyma.02G112600 Glycine max HOM05D004550 ORTHO05D005340 2.6e-36 155.6 110 70.0
Nn3g17356 Nelumbo nucifera HOM05D004550 ORTHO05D005340 2.6e-36 155.6 108 74.1
Prupe.3G261900 Prunus persica HOM05D004550 ORTHO05D005340 3.4e-36 155.2 103 74.8
Lj2g0016497 Lotus japonicus HOM05D004550 ORTHO05D005340 4.4e-36 154.8 110 71.8
EL10Ac6g13282 Beta vulgaris HOM05D004550 ORTHO05D005340 7.5e-36 154.1 108 71.3
FvH4_6g47773 Fragaria vesca HOM05D004550 ORTHO05D005340 7.5e-36 154.1 108 72.2
FAN05G1708 Fragaria x ananassa HOM05D004550 ORTHO05D005340 7.5e-36 154.1 108 72.2
Medtr5g043020 Medicago truncatula HOM05D004550 ORTHO05D005340 7.5e-36 154.1 110 71.8
Glyma.01G054200 Glycine max HOM05D004550 ORTHO05D005340 9.8e-36 153.7 109 69.7
CAN.G1200.3 Capsicum annuum HOM05D004550 ORTHO05D005340 1.3e-35 153.3 110 69.1
PGSC0003DMG400028333 Solanum tuberosum HOM05D004550 ORTHO05D005340 1.3e-35 153.3 110 69.1
Solyc05g012710.4 Solanum lycopersicum HOM05D004550 ORTHO05D005340 1.7e-35 152.9 110 68.2
Sopen05g007540 Solanum pennellii HOM05D004550 ORTHO05D005340 1.7e-35 152.9 110 68.2
FAN14G0263 Fragaria x ananassa HOM05D004550 ORTHO05D005340 2.2e-35 152.5 108 71.3
Lalb_Chr04g0255821 Lupinus albus HOM05D004550 ORTHO05D005340 2.2e-35 152.5 106 70.8
TPR.G30749 Trifolium pratense HOM05D004550 ORTHO05D005340 1.8e-34 149.4 106 72.6
Ah.02g129300 Amaranthus hybridus HOM05D004550 ORTHO05D005340 5.4e-34 147.9 108 69.4
CDE04G2021 Ceratophyllum demersum HOM05D004550 ORTHO05D005340 7.0e-34 147.5 105 68.6
Hund05856 Selenicereus undatus HOM05D004550 ORTHO05D005340 1.2e-33 146.7 101 72.3
HanXRQChr17g0545411 Helianthus annuus HOM05D004550 ORTHO05D005340 2.7e-33 145.6 108 67.6
Sc04g0007790 Simmondsia chinensis HOM05D004550 ORTHO05D005340 2.7e-33 145.6 108 69.4
Psat2g127440 Pisum sativum HOM05D004550 ORTHO05D005340 3.5e-33 145.2 109 67.0
ATR0730G201 Amborella trichopoda HOM05D004550 ORTHO05D005340 1.0e-32 143.7 110 69.1
GSVIVG01011473001 Vitis vinifera HOM05D004550 ORTHO05D005340 1.7e-32 142.9 109 66.1
Os12g0498400 Oryza sativa ssp. japonica HOM05D004550 ORTHO05D005340 3.8e-32 141.7 110 65.5
HPP92_018458 Vanilla planifolia HOM05D004550 ORTHO05D005340 5.0e-32 141.4 100 71.0
Sabra04G0067200 Salix brachista HOM05D004550 ORTHO05D005340 6.5e-32 141.0 109 67.0
PSO478G0019 Papaver somniferum HOM05D004550 ORTHO05D005340 7.2e-31 137.5 111 63.1
AUR62005866 Chenopodium quinoa HOM05D004550 ORTHO05D005340 1.6e-30 136.3 116 61.2
Gohir.D02G127801 Gossypium hirsutum HOM05D004550 ORTHO05D005340 3.6e-30 135.2 110 67.3
Gorai.005G143600 Gossypium raimondii HOM05D004550 ORTHO05D005340 3.6e-30 135.2 110 67.3
AUR62032858 Chenopodium quinoa HOM05D004550 ORTHO05D005340 1.4e-29 133.3 116 60.3
MSTRG.729 Avicennia marina HOM05D004550 ORTHO05D005340 1.8e-29 132.9 86 77.9
MELO3C012132.2 Cucumis melo HOM05D004550 ORTHO05D005340 2.3e-29 132.5 95 70.5
CsaV3_5G033110 Cucumis sativus L. HOM05D004550 ORTHO05D005340 3.0e-29 132.1 95 70.5
SEGI_17925 Sequoiadendron giganteum HOM05D004550 ORTHO05D005340 2.6e-28 129.0 104 67.3
Sed0010995 Sechium edule HOM05D004550 ORTHO05D005340 1.7e-27 126.3 95 67.4
ClCG05G023910 Citrullus lanatus HOM05D004550 ORTHO05D005340 3.7e-27 125.2 109 61.5
Pp3c23_20800 Physcomitrium patens HOM05D004550 ORTHO05D005340 2.9e-24 115.5 103 61.2
Actinidia33237 Actinidia chinensis HOM05D004550 ORTHO05D005340 1.9e-23 112.8 79 70.9
Zm00001eb409620 Zea mays HOM05D004550 ORTHO05D005340 2.5e-23 112.5 77 70.1
Mapoly0021s0017 Marchantia polymorpha HOM05D004550 ORTHO05D005340 4.3e-23 111.7 87 66.7
Pp3c20_5010 Physcomitrium patens HOM05D004550 ORTHO05D005340 2.8e-22 109.0 85 67.1
AagrBONN_evm.TU.Sc2ySwM_344.2821 Anthoceros agrestis HOM05D004550 ORTHO05D005340 6.1e-22 107.8 87 63.2
SMO141G0150 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 1.4e-21 106.7 85 61.2
BcaC08g45895 Brassica carinata HOM05D004550 ORTHO05D005340 5.2e-21 104.8 70 77.1
SMO356G0701 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 5.7e-20 101.3 88 62.5
Pp3c9_20530 Physcomitrium patens HOM05D004550 ORTHO05D005340 1.7e-19 99.8 86 57.0
BcaB03g15467 Brassica carinata HOM05D004550 ORTHO05D005340 2.7e-17 92.4 64 75.0
MD16G1066100 Malus domestica HOM05D004550 ORTHO05D005340 2.8e-14 82.4 52 80.8
C06p37000 Brassica napus HOM05D004550 ORTHO05D005340 1.4e-10 70.1 45 77.8
BolC6t38810H Brassica oleracea HOM05D004550 ORTHO05D005340 1.4e-10 70.1 45 77.8
Cre17.g720350 Chlamydomonas reinhardtii HOM05D004550 ORTHO05D005340 3.5e-09 65.5 91 38.5
Potri.017G088401 Populus trichocarpa HOM05D004550 ORTHO05D005340 2.3e-08 62.8 45 66.7
PRCOL_00005365 Prasinoderma coloniale HOM05D004550 ORTHO05D005340 3.3e-07 58.9 85 34.1


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