Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G326300 Theobroma cacao HOM05D007234 ORTHO05D008488 2.1e-291 1005.0 509 100.0
Thecc.07G065000 Theobroma cacao HOM05D007234 ORTHO05D008488 2.3e-43 181.0 147 62.6
Thecc.03G068700 Theobroma cacao HOM05D007234 ORTHO05D008488 5.4e-37 159.8 120 59.2
Thecc.05G135400 Theobroma cacao HOM05D007234 ORTHO05D008488 3.5e-36 157.1 131 56.5
Thecc.05G087600 Theobroma cacao HOM05D007234 ORTHO05D008488 4.7e-33 146.7 137 50.4
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 1.5e-26 125.2 253 30.4
Oeu055396.1 Olea europaea HOM05D007234 ORTHO05D008488 1.2e-25 122.1 242 35.1
MELO3C021476.2 Cucumis melo HOM05D007234 ORTHO05D008488 6.2e-25 119.8 255 30.2
CsaV3_6G014490 Cucumis sativus L. HOM05D007234 ORTHO05D008488 6.2e-25 119.8 267 29.2
Oeu045905.1 Olea europaea HOM05D007234 ORTHO05D008488 1.8e-24 118.2 270 31.5
Oeu049634.1 Olea europaea HOM05D007234 ORTHO05D008488 2.3e-24 117.9 270 31.9
Thecc.08G157800 Theobroma cacao HOM05D007234 ORTHO05D008488 2.0e-23 114.8 136 43.4
Oeu012540.1 Olea europaea HOM05D007234 ORTHO05D008488 1.9e-21 108.2 276 30.1
Thecc.01G243800 Theobroma cacao HOM05D007234 ORTHO05D008488 1.9e-21 108.2 104 47.1
Thecc.09G159400 Theobroma cacao HOM05D007234 ORTHO05D008488 2.4e-21 107.8 234 33.8
Oeu052241.1 Olea europaea HOM05D007234 ORTHO05D008488 1.6e-20 105.1 221 34.8
Thecc.09G220100 Theobroma cacao HOM05D007234 ORTHO05D008488 1.0e-19 102.4 93 46.2
Thecc.10G103500 Theobroma cacao HOM05D007234 ORTHO05D008488 1.3e-19 102.1 86 57.0
Oeu058994.1 Olea europaea HOM05D007234 ORTHO05D008488 2.3e-19 101.3 261 28.0
Oeu032765.1 Olea europaea HOM05D007234 ORTHO05D008488 1.9e-18 98.2 181 35.4
Oeu033898.1 Olea europaea HOM05D007234 ORTHO05D008488 1.9e-18 98.2 247 29.1
Oeu046571.1 Olea europaea HOM05D007234 ORTHO05D008488 2.5e-18 97.8 262 28.2
Oeu036146.1 Olea europaea HOM05D007234 ORTHO05D008488 1.6e-17 95.1 150 38.7
DCAR_031924 Daucus carota HOM05D007234 ORTHO05D008488 2.1e-17 94.7 134 35.8
DCAR_017447 Daucus carota HOM05D007234 ORTHO05D008488 2.8e-17 94.4 134 35.8
Oeu031169.1 Olea europaea HOM05D007234 ORTHO05D008488 2.8e-17 94.4 222 32.9
Oeu012507.1 Olea europaea HOM05D007234 ORTHO05D008488 1.4e-16 92.0 245 30.6
Oeu015519.1 Olea europaea HOM05D007234 ORTHO05D008488 1.8e-16 91.7 183 32.8
Oeu031407.1 Olea europaea HOM05D007234 ORTHO05D008488 1.8e-16 91.7 119 41.2
Oeu046272.1 Olea europaea HOM05D007234 ORTHO05D008488 3.1e-16 90.9 222 29.7
Oeu048494.1 Olea europaea HOM05D007234 ORTHO05D008488 3.1e-16 90.9 119 39.5
Oeu063638.1 Olea europaea HOM05D007234 ORTHO05D008488 3.1e-16 90.9 146 36.3
Oeu017048.1 Olea europaea HOM05D007234 ORTHO05D008488 4.0e-16 90.5 149 34.9
Oeu017546.1 Olea europaea HOM05D007234 ORTHO05D008488 5.2e-16 90.1 152 35.5
ClCG04G003070 Citrullus lanatus HOM05D007234 ORTHO05D008488 6.8e-16 89.7 124 41.9
Oeu040314.1 Olea europaea HOM05D007234 ORTHO05D008488 1.5e-15 88.6 119 39.5
Oeu049373.1 Olea europaea HOM05D007234 ORTHO05D008488 3.4e-15 87.4 150 34.0
MSTRG.11524 Avicennia marina HOM05D000247 ORTHO05D003114 4.4e-15 87.0 251 27.1
Oeu004578.1 Olea europaea HOM05D007234 ORTHO05D008488 4.4e-15 87.0 203 30.0
Oeu034190.1 Olea europaea HOM05D007234 ORTHO05D008488 5.8e-15 86.7 283 29.0
Oeu017104.1 Olea europaea HOM05D007234 ORTHO05D008488 7.6e-15 86.3 159 32.1
Oeu017565.1 Olea europaea HOM05D007234 ORTHO05D008488 7.6e-15 86.3 162 34.0
ECA247G2737 Erigeron canadensis HOM05D007234 ORTHO05D000570 1.3e-14 85.5 160 31.2
Oeu032573.1 Olea europaea HOM05D007234 ORTHO05D008488 1.7e-14 85.1 157 32.5
Oeu059603.1 Olea europaea HOM05D007234 ORTHO05D008488 2.2e-14 84.7 185 31.9
Oeu043667.1 Olea europaea HOM05D007234 ORTHO05D008488 1.4e-13 82.0 150 33.3
Oeu064434.1 Olea europaea HOM05D007234 ORTHO05D008488 4.1e-13 80.5 120 40.0
Oeu019659.1 Olea europaea HOM05D007234 ORTHO05D008488 7.1e-13 79.7 213 26.8
Oeu061250.1 Olea europaea HOM05D007234 ORTHO05D008488 1.2e-12 79.0 117 37.6
ECA247G3092 Erigeron canadensis HOM05D007234 ORTHO05D008488 1.6e-12 78.6 119 37.8
Oeu014914.1 Olea europaea HOM05D007234 ORTHO05D008488 1.3e-11 75.5 226 27.9
Oeu015287.1 Olea europaea HOM05D007234 ORTHO05D008488 1.3e-11 75.5 125 35.2
Oeu050318.1 Olea europaea HOM05D007234 ORTHO05D008488 1.7e-11 75.1 119 37.0
Ca_22864_v3 Cicer arietinum L. HOM05D026577 ORTHO05D008488 3.0e-11 74.3 119 37.0
Oeu034101.1 Olea europaea HOM05D007234 ORTHO05D008488 8.6e-11 72.8 94 41.5
arahy.Tifrunner.gnm1.ann1.VX3S13 Arachis hypogaea HOM05D005718 ORTHO05D004853 1.1e-10 72.4 125 35.2
Oeu037400.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-10 72.4 114 36.0
Oeu032973.1 Olea europaea HOM05D007234 ORTHO05D008488 1.5e-10 72.0 133 36.1
Oeu050317.1 Olea europaea HOM05D007234 ORTHO05D008488 1.5e-10 72.0 117 35.0
Ca_18815_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.5e-10 71.2 195 31.3
Oeu030945.1 Olea europaea HOM05D007234 ORTHO05D008488 2.5e-10 71.2 175 29.7
Gohir.D06G060950 Gossypium hirsutum HOM05D013638 ORTHO05D016332 3.3e-10 70.9 109 34.9
Oeu048278.5 Olea europaea HOM05D007234 ORTHO05D008488 4.3e-10 70.5 216 26.9
ClCG08G005270 Citrullus lanatus HOM05D007234 ORTHO05D008488 7.3e-10 69.7 107 38.3
Ca_05339_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.6e-10 69.3 242 26.9
Oeu006832.1 Olea europaea HOM05D007234 ORTHO05D008488 9.6e-10 69.3 120 35.0
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-09 68.9 144 34.0
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 1.6e-09 68.6 145 31.7
Oeu057558.1 Olea europaea HOM05D007234 ORTHO05D008488 1.6e-09 68.6 113 34.5
Ca_26948_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.1e-09 68.2 126 34.9
Oeu033734.1 Olea europaea HOM05D007234 ORTHO05D008488 2.1e-09 68.2 117 35.0
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.8e-09 67.8 169 29.0
Ca_20280_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.8e-09 67.8 169 30.8
VMungo1215G1710 Vigna mungo HOM05D009155 ORTHO05D004853 2.8e-09 67.8 191 28.8
Ca_28401_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.6e-09 67.4 124 34.7
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.7e-09 67.0 145 32.4
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 4.7e-09 67.0 144 30.6
Ca_27856_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.2e-09 66.6 124 33.9
Oeu002516.1 Olea europaea HOM05D007234 ORTHO05D008488 6.2e-09 66.6 174 27.0
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 6.2e-09 66.6 132 35.6
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 8.1e-09 66.2 137 29.2
Ca_28548_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-08 65.9 124 33.9
Oeu002515.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-08 65.9 308 23.7
VMungo0251G0465 Vigna mungo HOM05D009155 ORTHO05D004853 1.1e-08 65.9 196 28.6
Ca_11946_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-08 65.5 127 32.3
Psat4g127920 Pisum sativum HOM05D026577 ORTHO05D008488 1.4e-08 65.5 167 27.5
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 1.8e-08 65.1 114 33.3
VMungo0720G2649 Vigna mungo HOM05D009155 ORTHO05D004853 1.8e-08 65.1 128 32.0
Oeu058146.1 Olea europaea HOM05D007234 ORTHO05D008488 2.4e-08 64.7 238 27.7
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 2.4e-08 64.7 142 33.8
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.1e-08 64.3 125 34.4
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.1e-08 64.3 169 29.0
Ca_16582_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.0e-08 63.9 129 31.8
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 4.0e-08 63.9 120 33.3
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 4.0e-08 63.9 114 35.1
Ca_02739_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.2e-08 63.5 145 33.1
Medtr8g009850 Medicago truncatula HOM05D005718 ORTHO05D004853 5.2e-08 63.5 168 30.4
Ca_02606_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.8e-08 63.2 194 29.4
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.9e-08 62.8 177 29.4
Gorai.006G073100 Gossypium raimondii HOM05D019000 ORTHO05D020802 8.9e-08 62.8 120 28.3
Oeu043711.1 Olea europaea HOM05D007234 ORTHO05D008488 8.9e-08 62.8 195 25.1
Ca_05501_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-07 62.4 129 32.6
Gorai.001G202400 Gossypium raimondii HOM05D019000 ORTHO05D020802 1.2e-07 62.4 131 27.5
Oeu048275.1 Olea europaea HOM05D007234 ORTHO05D008488 1.2e-07 62.4 113 33.6
Psat7g222480 Pisum sativum HOM05D008979 ORTHO05D011829 1.2e-07 62.4 219 26.9
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 1.2e-07 62.4 122 32.8
VMungo0331G1190 Vigna mungo HOM05D009155 ORTHO05D004853 1.2e-07 62.4 190 29.5
VMungo0540G1633 Vigna mungo HOM05D000014 ORTHO05D000093 1.2e-07 62.4 190 26.8
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 1.5e-07 62.0 137 26.3
Ca_26515_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-07 61.6 158 30.4
Gorai.009G352400 Gossypium raimondii HOM05D019000 ORTHO05D020802 2.0e-07 61.6 157 24.2
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 2.0e-07 61.6 119 33.6
Gohir.D09G037250 Gossypium hirsutum HOM05D013638 ORTHO05D016332 2.6e-07 61.2 138 26.8
VMungo0464G1989 Vigna mungo HOM05D009155 ORTHO05D004853 3.4e-07 60.8 107 35.5
VMungo0647G1872 Vigna mungo HOM05D009155 ORTHO05D004853 3.4e-07 60.8 92 35.9
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 4.4e-07 60.5 127 33.1
VMungo0647G0776 Vigna mungo HOM05D009155 ORTHO05D004853 4.4e-07 60.5 134 32.1
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 4.4e-07 60.5 119 33.6
Ca_14596_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.8e-07 60.1 105 39.0
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.8e-07 60.1 180 28.9
Oeu064139.1 Olea europaea HOM05D007234 ORTHO05D008488 5.8e-07 60.1 75 37.3
VMungo0496G0001 Vigna mungo HOM05D009855 ORTHO05D010135 5.8e-07 60.1 107 30.8
arahy.Tifrunner.gnm1.ann1.N9HB9M Arachis hypogaea HOM05D005718 ORTHO05D004853 7.6e-07 59.7 109 33.0
Oeu062645.1 Olea europaea HOM05D007234 ORTHO05D008488 7.6e-07 59.7 93 32.3
Ca_02986_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.9e-07 59.3 224 26.3
Ca_12320_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.9e-07 59.3 160 30.6
Ca_26688_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.9e-07 59.3 129 31.8
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 9.9e-07 59.3 125 30.4
Oeu030946.1 Olea europaea HOM05D007234 ORTHO05D008488 1.3e-06 58.9 105 36.2
TPR.G18912 Trifolium pratense HOM05D005718 ORTHO05D004853 1.3e-06 58.9 137 25.5
Gohir.A13G112550 Gossypium hirsutum HOM05D013638 ORTHO05D016332 1.7e-06 58.5 77 36.4
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 1.7e-06 58.5 196 27.6
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-06 58.2 129 29.5
ClCG05G013100 Citrullus lanatus HOM05D000014 ORTHO05D000093 2.9e-06 57.8 157 23.6
PGSC0003DMG400034976 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.9e-06 57.8 145 28.3
VMungo0251G0612 Vigna mungo HOM05D009155 ORTHO05D004853 2.9e-06 57.8 165 29.1
VMungo1309G2955 Vigna mungo HOM05D009855 ORTHO05D010135 2.9e-06 57.8 104 29.8
Ca_31178_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.8e-06 57.4 151 30.5
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 3.8e-06 57.4 164 26.8
QL04p085714 Quercus lobata HOM05D000395 ORTHO05D000088 3.8e-06 57.4 164 26.8
Ca_17770_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.9e-06 57.0 102 36.3
Oeu002920.1 Olea europaea HOM05D007234 ORTHO05D008488 4.9e-06 57.0 129 31.8
QL07p009243 Quercus lobata HOM05D000395 ORTHO05D000088 4.9e-06 57.0 164 26.8
PGSC0003DMG400016022 Solanum tuberosum HOM05D054377 ORTHO05D051362 4.9e-06 57.0 179 25.7
Ca_12435_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.4e-06 56.6 197 27.4
Migut.K01060 Erythranthe guttata HOM05D029106 ORTHO05D003532 6.4e-06 56.6 204 23.5
Medtr5g095330 Medicago truncatula HOM05D005718 ORTHO05D004853 6.4e-06 56.6 117 32.5
QL10p043669 Quercus lobata HOM05D000395 ORTHO05D000088 6.4e-06 56.6 164 26.8
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.4e-06 56.6 110 29.1
VMungo0647G1817 Vigna mungo HOM05D009155 ORTHO05D004853 6.4e-06 56.6 121 32.2
PGSC0003DMG400034761 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.4e-06 56.2 84 31.0
PGSC0003DMG400039545 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.4e-06 56.2 121 26.4
PGSC0003DMG400046215 Solanum tuberosum HOM05D003150 ORTHO05D003532 8.4e-06 56.2 100 29.0
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 8.4e-06 56.2 115 30.4


User provided reference genes

Program Settings